Cupriavidus metallidurans: Rmet_4502
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Entry
Rmet_4502 CDS
T00351
Symbol
fabD
Name
(GenBank) Long-chain-fatty-acid-CoA ligase (Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II)
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme00061
Fatty acid biosynthesis
rme00071
Fatty acid degradation
rme01100
Metabolic pathways
rme01212
Fatty acid metabolism
rme02024
Quorum sensing
rme04146
Peroxisome
Module
rme_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rmet_4502 (fabD)
00071 Fatty acid degradation
Rmet_4502 (fabD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rmet_4502 (fabD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rmet_4502 (fabD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rme01004
]
Rmet_4502 (fabD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rme04147
]
Rmet_4502 (fabD)
Enzymes [BR:
rme01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rmet_4502 (fabD)
Lipid biosynthesis proteins [BR:
rme01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rmet_4502 (fabD)
Exosome [BR:
rme04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rmet_4502 (fabD)
Exosomal proteins of breast cancer cells
Rmet_4502 (fabD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABF11367
UniProt:
Q1LEQ9
LinkDB
All DBs
Position
megaplasmid:complement(1102857..1104551)
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AA seq
564 aa
AA seq
DB search
MKSASTSQPYRSPAWPAGLPGTLHVPQTSLFHNLEVAARRYPGKTAIQYFGTAITYAELL
DDVERMAGYLQQSCGIQPGDRVVLYSQNAPQFIVAYYAILRAEAVVVPANPMWLEAELEH
VVADSGAVAAFCGSELYERVASLHGKALRHVITYHYAGMLRDDGGLPVPAWLREPAPASR
AAPGGAMPVDWDTARNAGQRPRAHEAGYNTLCMLAYTSGTTGNPKGCMHTHGTMMSSAVG
SQVWRSSSPESVVLAVAPMFHLLGMQNCMHSPIYLGATVVLMPRWDRALAADLIERYRVS
AWGAPPAMLVDFFAQPDVARRDLSSLAFLGGGGAAMPDAVANMLQERFGLPYVEAYGMTE
TASFLLSNPRQKPKRECLGIATFGVDARVVDPESLAELPQGEIGEIVVHGGQVMQGYWNN
PQANAESFIEIAGKRFLRTGDLGFMDEEGYFFMRDRLKRMINASGFKVWPAEVENLLYGH
PAIHEACVIAARDEHRGETVKAVVALRPESRGTPEADAERIMAWCRERLAAYKVPRIVEF
VDALPKSATGKILWRALQEDAMRA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccgccagtacatcccagccttaccgttctcccgcctggcctgccggcctgcct
ggcacgctgcatgtgccgcagaccagcctgttccacaacctggaagtggccgcgcggcgc
tatcccggcaagacggcgatccagtatttcggcaccgcgatcacctatgcggaactgctg
gatgacgtcgaacggatggccggctatctgcagcaaagctgcggcattcagcccggggat
agggtagtgctttacagccagaacgccccgcagttcatcgtggcgtactacgccatcctg
cgtgccgaggcggtggtcgtgccagccaatccgatgtggctggaagccgaactggagcat
gtggttgccgatagcggggcggtggccgcgttctgcggcagcgaattgtatgagcgcgtc
gcgtcgctgcatggcaaggcgctgcgtcatgtgatcacgtaccactacgcggggatgctg
cgcgacgatggtggcctgccggttccggcctggctgcgcgagcctgctcccgcgtcgcgc
gcggccccaggtggcgccatgccagtggactgggacaccgcgcgcaatgctggccagcgt
ccgcgcgcgcacgaggctggctacaacacgctttgcatgctggcatatacctccggcacc
acgggcaatcccaagggctgcatgcatacccacggcaccatgatgagttccgcggtgggc
tcgcaagtctggcgcagcagttcgccggaatcggtggtgctcgcggtggcgccgatgttc
cacctgctgggcatgcagaactgcatgcattcgccgatctacctgggtgccaccgtggtg
ctgatgccgcgctgggaccgcgcgcttgccgccgatctgatcgagcgctaccgcgtctcg
gcctggggcgcgccgccggccatgctggtggactttttcgcgcagcccgatgtggcccgg
cgtgacctttccagcttggcttttctgggtggcggtggcgcggccatgcccgacgcggtg
gccaatatgttgcaggaacgcttcggcctgccgtacgtcgaggcctatggcatgaccgag
accgcgtcgttcctgctgtccaacccgcgccagaagcccaagcgtgagtgcctgggcatt
gccaccttcggcgtggacgcccgcgtggtggaccccgaatcgctcgccgaactgccgcag
ggcgagatcggcgagatcgtcgtccacggcggtcaggtgatgcagggctactggaacaac
ccgcaggccaatgcggaatccttcatcgaaatcgccggcaagcgctttctacgcaccggc
gacctcggtttcatggatgaagaaggctatttcttcatgcgcgaccgcctcaagcgcatg
atcaacgcgtccggcttcaaggtctggccggccgaggtggaaaacctgctctacggccac
ccggccatccacgaggcctgcgtgatcgccgcgcgcgatgagcatcgcggcgaaacggtc
aaggccgtggtggcgctgcgccccgaatcgcgcggcacgccggaggccgatgcggaacgc
atcatggcctggtgccgcgagcgtctggcggcctacaaggtgccgcgcatcgtcgagttc
gtggacgcgctgcccaaatcggccaccggcaagatcctgtggcgcgcgctgcaggaagac
gccatgcgggcatag
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