Cupriavidus metallidurans: Rmet_4749
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Entry
Rmet_4749 CDS
T00351
Symbol
hupB
Name
(GenBank) Histone-like bacterial DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rme
Cupriavidus metallidurans
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rme03032
]
Rmet_4749 (hupB)
03036 Chromosome and associated proteins [BR:
rme03036
]
Rmet_4749 (hupB)
03400 DNA repair and recombination proteins [BR:
rme03400
]
Rmet_4749 (hupB)
DNA replication proteins [BR:
rme03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Rmet_4749 (hupB)
Chromosome and associated proteins [BR:
rme03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Rmet_4749 (hupB)
DNA repair and recombination proteins [BR:
rme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Rmet_4749 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
UBA_HYPK
FIMAH
HU-CCDC81_euk_1
Orbi_NS3
DUF6849
Motif
Other DBs
NCBI-ProteinID:
ABF11611
UniProt:
Q1LE15
LinkDB
All DBs
Position
megaplasmid:complement(1393134..1393415)
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AA seq
93 aa
AA seq
DB search
MNKGELVSAIAAEAELSNAAAERALNAALDSIKKAVAKGDSVTLVGFGSFSSGKRAARTG
RNPRTGETIKIPAAKTVKFSAGQGFKDAVNKKK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaggtgaactggtatcggccatcgccgcggaagcagaactcagcaacgccgcc
gccgagcgcgcgctgaacgctgcgctggacagtatcaagaaggcagtagccaagggcgac
tcggtcactctggtgggttttggcagtttcagctcgggcaaacgtgctgcccgcaccggt
cgtaatccgcgcaccggcgaaacgatcaagattcctgcggccaagaccgtgaagttctcg
gcaggtcagggtttcaaggacgctgtgaacaagaagaagtaa
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