Cupriavidus metallidurans: Rmet_4822
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Entry
Rmet_4822 CDS
T00351
Name
(GenBank) conserved hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
rme
Cupriavidus metallidurans
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rme03009
]
Rmet_4822
Ribosome biogenesis [BR:
rme03009
]
Prokaryotic type
ribosomal protein modification factors
Rmet_4822
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
ABF11684
UniProt:
Q1LDU2
LinkDB
All DBs
Position
megaplasmid:complement(1472967..1475171)
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AA seq
734 aa
AA seq
DB search
MEIKVDFLDKLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKVYCV
ARNIPTDNIRLSQNNIVDPENRYQQIFKIQVELPADISAKDRQGILRSIDRCTVKKVVQT
GPEFVIEEVENLDADAQSLLTLKPASGASTYISGKDLPLEQTIANMSGILAGLGMKIEIA
SWRNIVPNVWSLHIRDAHSSMCFTNGKGATKESALASALGEFIERLNCNHFYAGTFWGED
LANAAFVHYPNERWFKPGRKDALPVEILDEYCLPIYNPDGELRGSHLYETNSGNVQRGIC
SLPFVRQSDGEVVYFPSNLVENLYASNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEM
ALPDVPQEVLAKYPGIMAGIQVLEEQGFPILVKDASLGGIYPVMCVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDLPRPSFVSNAVTEPNNFVEHFIDSSGVVSWRF
FSAKSDFDFVEWDFSGQGKNSNTEEAATLLSILEGMGKEVYMAVYDQLGSVACRILVPGY
SEVYPVEDLIWDNTNKALSFRADILNLHRLDDESLEALLERLDNSELDEYADIATLIGIE
FDENTDWGQLTVLELKLLIHLALQQFEAAHELVGAFLQYNDNTLERGLFYQALDVVLEVL
LDDDLDLEDYKVNFRRMYGNARMDAVLGSVDGSVRFFGLTPTSMKLEGLDRHHRLIDSYK
KLHAARANAAAAAS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaaggtcgactttctcgataagctgcgtcttgaagctaagttcgatgatttc
acggtaatagctgaccagcctatccgttataaaggcgatggttccgcacctggtccgttc
gattattttctcgcctcgtcggctttgtgtgcggcctactttgtcaaagtgtactgtgtg
gcccgcaatattcccaccgataatatccgcctgtcgcagaataatattgttgatccggaa
aacagatatcagcagattttcaagatccaggtcgaattgccagcagatatttctgccaag
gaccgccagggtatcttgcgatccatcgatcgctgcacggtaaaaaaggtggtgcaaacc
ggacccgagtttgtgatcgaagaggtggagaacctggacgccgatgctcaatcgttgctg
acgttgaagccggcgtctggcgccagcacctatatttcaggcaaggatctcccattggag
caaactatcgccaatatgtcaggcattttggcgggcctggggatgaagattgaaatcgcg
tcatggcgcaatatcgttcccaatgtctggtcgctacatatccgtgacgcgcactcgtca
atgtgtttcaccaacggcaagggagcaaccaaggaaagcgcattggcgtcggcgttgggt
gaatttatcgaacgcctgaattgcaaccatttttatgccggtacattctggggcgaagat
ctcgccaatgcggcgtttgtacactacccgaacgagcgctggttcaagccgggacgcaaa
gatgcgctacccgttgaaattctcgatgaatactgcctgcctatatacaatcccgatggc
gagttacgcggctcgcatctgtacgagaccaactcggggaatgtgcagcgtggtatctgt
tcgctgcccttcgtacgccagtcagacggcgaagtggtgtatttcccctccaatctggtc
gaaaatctttacgccagcaatggcatgagtgcaggcaatacactggccgaagcacaggtg
caatgcttgtcggagattttcgagcgggcggtaaagcgcgagattctggagggcgaaatg
gcactgcctgatgtgccccaggaagtgctggcgaaatatcctggcattatggctggcatt
caggtgctggaagagcaaggttttccgatattggtgaaggatgcatcgttgggtggaatc
tatccggtgatgtgcgtcaccttgatgaacccacgcactggcggtgtctttgcttcgttc
ggtgcgcacccaagcttcgaggtggcgctggaacggagtttgacggaattgctgcagggt
cgtagttttgaaggcctgaacgatctaccacggcccagctttgtcagtaatgccgtgact
gagccaaacaattttgtcgagcacttcattgactccagcggcgtggtgtcgtggcgcttt
ttcagcgccaaatcggatttcgattttgtcgagtgggatttttctggccagggcaagaat
tccaataccgaggaagcagcaaccttgctcagcatcctggaaggcatgggcaaggaagtg
tatatggcggtgtatgaccagctcggctccgttgcttgccggatattggttcctggctat
tcggaagtttatcctgtcgaggatctgatctgggataacacaaacaaggcactgtcgttc
cgcgcagacattttgaacttgcatcgcctggacgacgaaagcctggaggccctgcttgag
cgcctggataacagtgagctcgatgaatacgccgacatcgccacgctgatcggcatagag
tttgacgagaataccgattggggccagctgacagtgttggagttgaagctgctcattcat
ctcgcgttgcagcaatttgaggcggcgcacgaactggtgggcgccttcttgcaatacaac
gacaacacgctcgagcgcggactgttttaccaagccttggatgtggtgctggaggtgctg
ttggatgacgaccttgacctggaagactacaaggtcaacttccgtcggatgtatggcaat
gcgcggatggacgcggtgctcggttcagttgacggcagcgtgcgtttctttggtttgacg
ccaaccagcatgaaattggaggggctcgacaggcaccaccgcctgattgacagctacaag
aaattgcacgccgcgcgggcaaatgcagcggctgcagccagttaa
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