Cupriavidus metallidurans: Rmet_4888
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Entry
Rmet_4888 CDS
T00351
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme00010
Glycolysis / Gluconeogenesis
rme00020
Citrate cycle (TCA cycle)
rme00260
Glycine, serine and threonine metabolism
rme00280
Valine, leucine and isoleucine degradation
rme00310
Lysine degradation
rme00380
Tryptophan metabolism
rme00620
Pyruvate metabolism
rme00630
Glyoxylate and dicarboxylate metabolism
rme00640
Propanoate metabolism
rme00670
One carbon pool by folate
rme00785
Lipoic acid metabolism
rme01100
Metabolic pathways
rme01110
Biosynthesis of secondary metabolites
rme01120
Microbial metabolism in diverse environments
rme01200
Carbon metabolism
rme01210
2-Oxocarboxylic acid metabolism
rme01240
Biosynthesis of cofactors
Module
rme_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rme_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rme_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
rme_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rme_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Rmet_4888 (lpdA)
00020 Citrate cycle (TCA cycle)
Rmet_4888 (lpdA)
00620 Pyruvate metabolism
Rmet_4888 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
Rmet_4888 (lpdA)
00640 Propanoate metabolism
Rmet_4888 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Rmet_4888 (lpdA)
00280 Valine, leucine and isoleucine degradation
Rmet_4888 (lpdA)
00310 Lysine degradation
Rmet_4888 (lpdA)
00380 Tryptophan metabolism
Rmet_4888 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Rmet_4888 (lpdA)
00670 One carbon pool by folate
Rmet_4888 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rme04147
]
Rmet_4888 (lpdA)
Enzymes [BR:
rme01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
Rmet_4888 (lpdA)
Exosome [BR:
rme04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
Rmet_4888 (lpdA)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox_3
Pyr_redox
GIDA
Thi4
Lys_Orn_oxgnase
FAD_binding_2
HI0933_like
FAD_binding_3
AlaDh_PNT_C
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
ABF11750
UniProt:
Q1LDM6
LinkDB
All DBs
Position
megaplasmid:complement(1549938..1551380)
Genome browser
AA seq
480 aa
AA seq
DB search
MNTNQNAQTAQTVQTVQTDVAIIGAGTAGLAAYRAAIAAGKRAVIIEGGAYGTTCARVGC
MPSKLLIAAAEAAHEARHTAAFGVHVDGPVRIDGREVMQRVRSERDRFVGFVVRGVESIP
QDDRLIGRARFIDNTILQVDDHTVVRASRVVIATGSRPAVPPSFGVFGDRLIVNDDVFSW
EDLPQSVAVFGPGVIGLELGQALSRLGVRVRVFGVGGGVGPLSDPEIRAYAAKSFNQEFS
LLADARVLEMRREGDDAVITFEDADGQTVTERFAYVLAATGRRPNVDTLALGNTALELDG
RGVPTFDPVTLQCGESPIFIAGDANNVLPLLHEAADEGKIAGENAALWPKVGPLTRRAPI
AVVFSDPQIAMVGKRFAELTPGSFVTGEVSFEDQGRSRVMLKNRGLMHVYADRATGRFIG
AEWIGPRAENIAHLLAWSYQQGLTIAAMLAMPFYHPVVEEGLRTALRDAQAKLAQLQEAA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgaaccagaatgcccagaccgctcaaactgtccagaccgtccagactgatgtg
gccatcatcggcgcgggcactgccggcctggccgcctaccgcgcggccattgccgccggc
aagcgcgccgtgatcatcgagggcggggcgtatggcacgacctgcgcccgcgtgggctgc
atgccgtcgaagctgctgattgccgcggcggaagccgcgcacgaagcgcgtcacactgct
gcatttggcgtgcacgtggatggcccggtccgtatcgacggcagggaagtcatgcagcgc
gtgcggagcgaacgcgaccgctttgtcggcttcgtggtgcgcggcgtggagagcattccc
caggacgaccgcctgatcggccgggcgcggttcatcgacaacacgatcctccaggttgac
gaccacaccgtcgtgcgcgcaagccgcgtggtaatcgccacgggctcgcgccccgccgta
ccgccgtcctttggcgtgttcggcgatcgcctgatcgtcaatgacgatgtgttctcgtgg
gaagacctgccccaaagcgtggccgtgttcggcccgggcgtgattggtttggaactgggg
caagcactgtcgcggcttggcgtgcgggtgcgcgtgtttggtgtcggtggcggcgtcggt
ccgttgtcggaccccgagattcgtgcttacgctgccaagtccttcaaccaggaattctcg
ctgttggcggatgcgcgcgtgcttgagatgcgccgcgagggcgacgacgccgttatcacg
ttcgaagacgccgacggccagaccgtgacggagcgctttgcctacgtgctggccgccacg
ggtcgccggcccaatgtcgatacgcttgcgctgggcaacaccgcgctggaactcgatggg
cggggcgtaccgacgttcgacccggtgacgctccagtgcggtgaatcgccgatcttcatc
gctggcgatgccaataacgtcctgccgctgctgcatgaggcggccgacgaaggcaagatt
gctggcgaaaacgctgcgctctggccgaaggtcgggccgctgacgcggcgcgcgccgatc
gcggtggtgttctccgatccgcagatcgcgatggtcggcaagcgttttgccgaactgaca
ccgggcagcttcgtgactggcgaggtcagcttcgaggatcagggccgcagccgtgtgatg
ctcaagaaccgtgggctgatgcacgtctacgcggatcgcgccacaggccgctttattggc
gctgagtggattggcccgcgcgccgagaatatcgcgcatctgctggcgtggtcgtaccaa
caggggctgacgatcgccgcgatgctggccatgcctttctaccatcccgttgtggaagag
ggcttgcgcacggcgctgcgtgatgcgcaagccaagctggcgcaattgcaggaagccgcc
tga
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