Cupriavidus metallidurans: Rmet_4910
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Entry
Rmet_4910 CDS
T00351
Symbol
xthA3
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rmet_4910 (xthA3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rme03400
]
Rmet_4910 (xthA3)
Enzymes [BR:
rme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Rmet_4910 (xthA3)
DNA repair and recombination proteins [BR:
rme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Rmet_4910 (xthA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ABF11772
UniProt:
Q1LDK4
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All DBs
Position
megaplasmid:complement(1572151..1573002)
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AA seq
283 aa
AA seq
DB search
MGHLKIATFNINGIHARLPSLLAWLEREQPDVACLQELKAVDESFPVAELHAAGYGAVWQ
GQKSWNGVAILAKGSDPVEVRRGLPGDAADTQSRYIEAAVAGVLVACLYLPNGNPQPGPK
FEYKLAWFERLIRHASTLYASGHPVVLAGDFNVVPTDDDIYNPRSWLKDALLQPASRECY
RQLLEQGWTDALRTRYPDTRIYTFWDYFRQHWQKDSGLRIDHLLLSRSLAQHMRDAGVDK
WVRGEPHASDHAPAWVEIEMGAEAEARTKTTPAARARRRASGA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgggccatctcaagatcgcgacgttcaatatcaacggcatccacgcgcggctgccgtcg
ctgctggcatggctggagcgcgagcagcccgacgtagcctgtctgcaggaactcaaggcc
gtggacgaatcatttccggtggcagagctccacgcggcaggctacggcgcagtctggcag
gggcagaaatcatggaatggtgtggcgatcctcgcaaaagggtcggatccggtcgaagtg
cggcgcggtctgccaggcgatgctgctgatacgcagagccgctatatcgaggcggccgtt
gcaggcgtgctggtggcgtgcctctacctgccgaacggcaatccccagccagggccgaag
ttcgaatacaagctggcttggttcgaacggttgattcgacacgcaagcacgctctacgcc
agcggccacccggtggtactggccggcgatttcaacgtggtgccgaccgacgacgacatc
tacaatccgcgctcgtggctcaaggacgcactgttgcagccggcgtctcgcgaatgctat
cgacagttgcttgagcagggatggaccgatgcgctacgcacacgctatcccgacacccgg
atctatacgttctgggactactttcgtcagcactggcagaaggactcgggtttgcgcatc
gatcatctgctgctgagccgaagtctggcgcagcacatgcgtgacgctggcgtcgacaaa
tgggtgcgtggcgagccgcacgcgagcgatcatgcgccggcgtgggtggaaatagaaatg
ggggcggaagcggaagcgagaacgaaaacaacgcccgccgcgagagcaagacggcgggcg
tcgggcgcgtga
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