Cupriavidus metallidurans: Rmet_5284
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Entry
Rmet_5284 CDS
T00351
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase, specific for 23S rRNA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
rme
Cupriavidus metallidurans
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rme03009
]
Rmet_5284 (dbpA)
Enzymes [BR:
rme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Rmet_5284 (dbpA)
Ribosome biogenesis [BR:
rme03009
]
Prokaryotic type
rRNA helicases
Rmet_5284 (dbpA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABF12143
UniProt:
Q1LCI3
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All DBs
Position
megaplasmid:complement(1984131..1985534)
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AA seq
467 aa
AA seq
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MTSSAPTSFATLPLSAAMQATLVQLGYDAMTPIQAASLPLALAGHDLIAQARTGSGKTAA
FALSLLHRLDPRPLDVQALVLCPTRELADQVTQEIRRLARAEDNVKVLTLSGGTPIRPQV
ESLVHGAHVVVGTPGRIIDHLDRGSLNIDAINTLVLDEADRMLDMGFHDDIAFIASHAPK
DRQTLLFSATYPAAIDKLAHRFLRQPKTVKVEEAHDAATITQRFYEVEEGDRLNAVGRLL
DHFRPATTLAFCNTKARCRDLADLLRAQGYAALELHGDLDQRDRDQVLVQFANRSCSVLV
ATDVAARGLDIAQLEAVINVDVTPDPEVHVHRVGRTGRAGEAGSAFSLVSLDEMGRVGNI
EQHQGGEFEWHALDELKPSGGGRLLPPMVTLQMLGGRKEKIRPGDILGALTGEAGFTKEQ
IGKISVMEMSTYIAVDRAIGREAVKRLNEGKVKGRKVRVRMLTTDQR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacttcttcagcccctacctcattcgccacgctgccgctgtccgcggccatgcaggct
accctcgtccagctcggctacgacgccatgacgccgatccaggccgccagcctgccgctc
gcgctggctggtcacgacctcatcgcccaggcccgcaccggcagcggcaagaccgcagcg
ttcgcgctctcactgctgcatcgtctcgatccgcgtccgctcgacgtacaggcgctggtg
ctctgtcccacacgtgaactggccgatcaggtcacacaggagatccgtcgtctcgcccgc
gcggaggacaacgtcaaggtgctgacgctcagtggcggcacgccaatccggccgcaggtg
gagagccttgttcacggcgcgcacgttgtcgtaggcacgccgggccgcatcatcgatcac
ctcgatcgcggaagcctgaatatcgatgcgatcaacacgctggtgctcgatgaagcggac
cgcatgctcgacatgggctttcacgatgacatcgcatttatcgccagccacgcaccgaag
gaccggcagacgctgctgttctcggccacctatccggctgccatcgacaagctcgcccat
cgcttcctgcgccagccgaagacggtgaaggtggaggaggcgcacgacgcggccaccatc
acccaacgcttctacgaggtggaggagggcgatcgtctcaacgccgtcggccgattgctc
gaccatttccgcccggccaccacactcgccttctgtaatacgaaggcgcgctgccgcgat
ctggccgacctgctgcgcgcgcagggatatgccgcgcttgaactgcacggtgacctcgat
cagcgcgatcgcgaccaggtgctggtgcagtttgctaaccggagctgctcggtgctggta
gctaccgacgtggccgcacgcgggctcgacatcgcgcagctggaagccgtgatcaacgtg
gacgtgacgcccgaccccgaggtccatgtccaccgcgtcggccgtaccggacgcgctggc
gaagcaggctcggccttcagcctcgtcagcctggatgaaatgggtcgcgtcggcaacatc
gagcagcaccagggcggtgagttcgaatggcacgcgcttgacgaactgaagccgtcaggc
ggcggacgtctgctgccgccaatggtcacgctgcagatgctgggtgggcgcaaggagaag
atccggcccggcgacatcctcggcgcgctgaccggagaggctggcttcacaaaggagcag
atcggcaagatcagcgtgatggagatgtcgacctatatcgccgtggaccgcgccatcggt
cgcgaggcggtgaaacggctgaacgaaggcaaggtgaagggccgcaaggtgagagtgaga
atgctgacgaccgatcagcggtaa
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