Cupriavidus metallidurans: Rmet_5309
Help
Entry
Rmet_5309 CDS
T00351
Name
(GenBank) sensor histidine kinase with GAF domain
Organism
rme
Cupriavidus metallidurans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_16
HATPase_c
Pkinase
GAF_2
HisKA
GAF
Kinase-like
HATPase_c_5
AAA_22
HATPase_c_2
NACHT
Hpr_kinase_C
nSTAND3
RsgA_GTPase
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ABF12168
UniProt:
Q1LCF8
LinkDB
All DBs
Position
megaplasmid:complement(2012008..2017242)
Genome browser
AA seq
1744 aa
AA seq
DB search
MRDDALASTSQPIATSMTSLPRIEHAPVPAFDPVWLARVESTVLLTGDHVQSCRLFDPVS
QTHWFAQSAPLTATAVCERLRNAARLATRMESSWAAIPAATIWTPDRLVLISDAEASTQF
GMVNASEREDVPIAARLELAIGAVRAVAAMHGRGLLQGVIRPESFLLDDDGRMRLTGFGY
AVAVEEPCAALRHPADTVLPYLAPELMRQDGARPSVGADLYALGVTLYKLLTGELPFVAD
SPSGWQHAHMAIEPAPPQSRRPDLPAVLGQIVIKLMAKDAGSRYTSAAALLADLLRVRAE
WLQRGRIEPFCLDMPGTLPLPGTGSGLQGRLSGRAREMEVLHGALARVRATGVSELVLLA
GAAGVGKSALAEWLCGHADQTGARFAVGKSDQLQRDIPYAPVVQAITSLTMTLLGQDDAS
LQQVRLRWLDRLTGQGRAVAELAPVVEYVLGATVPLSEVPARQAQARIESAVLRTFAAFA
APGEPLVLFIDDLQWADASTLGLLEAFAAHRPANILLIAAYREPGHEMAQRLAWLQQGSR
SGGLPVSSIALQSLPGRAVADLVATALDAPVAQVAPLARAIHARTGGNPLFCVQLLRALI
DDGVLARGEAGWAWDDAALAHRRYSDNVIELMLRRFARLPKSGTALLQHLACVGIRGEAA
LQARVAGVGPDELAHGLRPFIDAGMIVEVPEGFAFQHDRVLEAAYSLVEPEARPAAHARV
ARVMIEHWGEHAADHAFEIGSQIERTAGQALSEPERVMFVRALNDSARRAKRAAVLTRAA
SHVDLAFTLMDATWWDTHYPLARDAHLLRCECLLAQADLDRAAREIDTLLQRAMPAVDKA
AVYRLLATLQTVRSDYEGAINAALSGLALVDVHLERHPSPARMREAYESVMVLLGERSID
SLGELPVTADARMHTVMGLLSTLISSQFVRDGISFLHVATMVELSLAHGATPETPYGLSW
FGVFIASLYDAYEDGLAFGLAAMALVERHEFQAEQIATLVAVDQVSVWTRPLAFALGLAQ
EAVALGRESGDIGMACYACNHIVSDLLAMGEPLALVDEEIERGVGLTRLVRYADIERILA
AQRLFLRSLRDGGDGPASTVAQRADDATSFSTRFWVWLHDGMAWAYRGQWMHALGSLRQA
EALAWSAPAHINVADCRLYLALALAHAAPADVDGVDGVEGLDRAVVLAALAGHRDRFARW
TALNPLTFRNKLLLIDAEMLRLQGDAMRALASYEQSARVAAASGFVHEQALACELAGALC
LANGLPDSGLHHLHSARDAYRRWGAHHKADQLCCQYPELGDAGAGGPEPVPAEPARVAAG
WELGMRAAQAMSSERVMDRLIESLMADVVVHAGAQYGLLLLMRGDRPMIEASARVVDGAV
STTLGAVEPNDDLLPLTVLNSVLRTRQTFALADASADAPSIRMRGASGRRLRSLLCLPLV
RGGTLIGAYYLENNLAPGVFGAGRIAELEVLAPQVAIALETARLYEQLIDENDRRLAAEM
GLRSARAELARTSHLTVMGTLAASIAHEVNQPLTAIVASVDASLRWLNRATPNLGEVQDG
LAHIRKNGLRAAEIIRALRALARQTPSVMTPLQPDEVLSEVLDMVRMEIAGHGVRVSTSL
STGGALVAADRVQLQQVMLNLITNAIDAMATTPPDARDLVIASALENADVVIRVEDAGRG
IPDAMRQRLFDPFITSKQSGMGMGLAICKSIVEAHGGELDAAPRDGGGTVFTFRLPVLGS
ATRP
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacgacgcactcgcctccacgagccagcccatcgccaccagcatgacctccctc
ccccgcatcgaacacgctcccgtgccggccttcgaccctgtctggcttgcgcgggtcgaa
tcgaccgtgctgctgacgggagatcacgtccagtcctgccgactgtttgacccggtctcg
cagacccactggtttgcccaaagcgcgccgctgacggccacggccgtgtgcgagcgcctg
cggaacgcggcgcggcttgccacgcgcatggagtcatcgtgggcggcgataccggcggcc
acgatctggacgcctgaccggcttgtgctgatcagcgacgccgaggcctccacccaattc
ggcatggtgaacgccagcgagcgcgaagacgtcccgatcgccgcccgcctggaactggca
atcggcgcggtcagggccgtggcggccatgcatgggcgcggcctgctgcaaggtgtgatc
cggccagaaagcttcctgctcgacgacgatgggcgcatgcggctcacggggttcggatat
gccgtggccgttgaggaaccctgcgccgcgctgcggcatccggctgataccgtcttgcca
tatctggcaccggaactgatgcggcaggatggggcgcggccgagcgtcggcgccgatctc
tacgcgctcggtgtcacgctatacaagctactgaccggcgaactgccgttcgttgcggac
tcgccgtccggatggcagcacgcgcatatggccatcgagccggccccgccgcagtcgcgt
cggcccgatttgcctgccgtgcttggccagatcgtcatcaagctgatggccaaggatgcc
ggtagccgctatacctcggcggcggcgctgctggcggacctgctacgtgtccgtgccgag
tggctgcagcgcgggcgtatcgaaccgttctgcctcgacatgccgggcacgctgccgttg
ccagggacggggtcgggccttcaggggcggctgtccggccgcgccagggagatggaggtg
ctgcatggcgcgctggcacgtgtccgtgcgaccggggtatcggaactggtactactcgcc
ggtgcggccggtgtgggaaagtcggcattggccgaatggctgtgcgggcacgcggaccag
accggggcccgcttcgcggtgggcaagagcgatcagttgcagcgcgatattccctatgcg
ccggtggtgcaggccattacatcgctgaccatgacgttgctcggccaggacgatgcgtcg
ttgcagcaggtgcgcctgcgctggctcgatcggctgaccgggcaggggcgcgcggtcgcc
gaactggcgcccgtcgtcgagtacgtactgggcgccaccgtgccgctctcggaagtgccg
gcccgtcaggctcaggcgcggatcgaaagcgcggtactgcgtacgtttgctgcgttcgcc
gcacccggtgagccgctggtgctgttcattgatgacctgcaatgggccgatgcttccacg
cttggcctgctcgaggcgttcgcggcacatcgccccgccaacatcctgctgatcgcagcc
tatcgcgagcccggccacgaaatggcgcagcgcctggcgtggttgcagcagggcagtcgt
agcggtggattgccggtgtcgagcattgcgctccagtcactgcccgggcgggccgtggcc
gatctggtggccaccgcgctcgatgcgccggtggcgcaggtggcgccacttgcccgtgcg
atccacgccagaaccggcggcaatccgcttttttgcgtgcagctgctgcgggcgctgatt
gacgacggcgtgcttgcgcgtggcgaagccggctgggcctgggacgatgccgcgctggcg
caccggcgctactcggacaacgtgatcgaactgatgctacggcgcttcgcgcggctgccg
aagtcgggcaccgcgctgctgcagcatctggcatgcgtgggcattcgcggtgaagcggcg
ttgcaggcccgcgtggccggcgtcgggccggatgaactggcccacgggctgcgtccgttc
atcgatgccgggatgatcgtcgaggtgccggagggcttcgcgttccagcatgaccgcgtg
ctggaagccgcctattcgttggtggaaccggaggcgcgcccggccgcgcatgcacgtgtg
gcacgcgtcatgatcgaacactggggcgagcacgcggcggaccacgcgttcgagatcggc
agccagatcgagcggactgcggggcaggcgctatccgagcccgagcgggtgatgttcgtg
cgggcgctcaatgactcggcgagacgggccaagcgtgcggccgtgctgacgcgcgcggcc
agccatgtggatctggcgttcacgttgatggatgcaacctggtgggacacccactacccg
ctggcgcgcgacgcgcatctgttgcgctgcgagtgcctgctggcgcaggccgatctcgac
cgcgccgcgcgggagatcgacaccttgctgcaacgcgcgatgccggcggtcgacaaggcc
gccgtgtatcgcctgctggctacgctgcagaccgtacggtccgactacgaaggggcgatc
aatgccgcgctttcagggctggcgctggtggacgtgcatctcgaacgacacccgtcgccc
gcgcgaatgcgggaggcctacgaatcggtcatggtgttgcttggcgaaaggtccatcgac
agtcttggcgagcttcccgtcacggccgacgcgcggatgcacacggtcatggggttgcta
tcgacgctgatttcttcgcagttcgtgcgcgatgggatcagcttccttcatgtggcgacg
atggtggaactctcgctcgcgcatggcgcgacacccgagacgccctatggcctttcctgg
ttcggcgtctttatcgccagcctttatgacgcgtacgaagacggcctcgcctttgggctg
gcggcgatggcgctggtggagcggcatgagtttcaggccgagcaaattgccacgctggtg
gcggtggaccaggtcagcgtctggacccgcccgctggcgttcgcgctcggactcgcccag
gaggccgtggcactggggcgggagtcgggcgatatcggcatggcctgctatgcctgcaat
cacatcgtctcggatttgctggcgatgggcgagccgcttgcacttgtcgatgaagagatc
gaacgtggcgtgggcctgacacggctggttcgctatgccgatatcgagcggattctggct
gcacagcggctcttcctgcgcagcctgcgcgacggtggcgatggcccggcatcgacggtc
gcgcagcgggccgatgacgcgacctctttctcgacgcgcttctgggtctggctccacgac
ggcatggcgtgggcataccgtggccaatggatgcacgcgctcggcagcctgcggcaggcg
gaagcgctggcatggtcggcgccggcccatatcaacgtggccgattgccgcttgtacctg
gcattggcgctggcacatgccgcgccggccgatgtcgatggtgtcgatggtgtcgagggt
ctcgatcgtgccgtagtcctcgccgcgctggccggtcaccgggaccgctttgcgcgctgg
actgcgctgaatccgctgacgttccggaacaagctgctgctgatcgacgcggaaatgctg
cgtctgcaaggcgatgccatgcgggcgctggcgagttacgagcagtcggcgcgggtcgcg
gcggcatcggggttcgtgcacgagcaggcgctcgcttgcgagctggcgggtgcgctgtgt
ctggccaacgggctgccggactcagggctgcaccatctgcattcggcacgcgacgcgtat
cgccgctggggtgctcaccacaaggcggaccagctctgctgccagtatcccgagcttggt
gatgccggtgcgggtggcccggagccggtgccagccgagccggcgcgggtggcagccggc
tgggaactcggcatgcgggccgcccaggccatgagcagcgagcgcgtcatggatcggctg
attgagtcgctaatggccgatgtggtggtccatgccggtgcgcagtacgggttgctgctg
ctgatgcgtggcgatcgtccgatgatcgaggcgtccgcgcgcgtggtcgacggcgccgtt
tccaccacgcttggcgccgtagagccgaacgacgaccttctgccgcttaccgtcctcaac
agcgtcctgcgcacgcgtcagaccttcgcgctggctgatgcctcggccgatgcgccgtcg
atccggatgcgcggcgcgtccgggcggcggttgcgctcgctgttgtgcctgccgctggtg
cgcggcggcacgttgatcggcgcgtactaccttgaaaacaacctggcgccgggcgtgttc
ggtgctggccggattgccgaactggaggtgctggcgccgcaggtggcgattgcgctggag
actgcgcggctctacgagcaattgatcgacgagaacgatcgccgcctggcagccgagatg
ggcctgcgttcggcccgtgccgagcttgcgcggacctctcatctgacggtgatgggcacg
ctggcggcctccatcgcccatgaggtgaaccagccgctgacggcgatcgtggcgtcggtc
gatgccagcctgcgctggctcaaccgcgccacaccaaatctcggcgaggttcaggacggg
ctcgcgcatatccgcaagaatggcctgcgcgcagccgagatcattcgtgccttgcgcgcg
ctggccaggcagaccccatcggtgatgacaccgctgcagccagacgaggttctgagcgaa
gtgctcgatatggtgcgtatggaaatcgccggacacggcgtgcgggtctcgacgagcttg
tccacgggcggcgcgctggtggcggcagatcgcgtgcagttgcagcaggtgatgctgaac
ctgatcaccaatgctatcgacgcaatggcgacgacgccgccggatgcgcgcgatctggtg
attgcttcggcgctggagaatgccgacgtcgtgatccgggtcgaggacgccggccgcggc
attcccgacgccatgcgtcagcggctgttcgacccgttcatcaccagcaagcagagcggc
atgggcatggggcttgccatctgcaagtcgatcgtcgaggcccacggcggcgagctcgat
gcggcgccgcgcgatggcggtggcacggtgttcacgttccggctgccagttctggggagc
gcgacgcgcccttga
DBGET
integrated database retrieval system
