Cupriavidus metallidurans: Rmet_5341
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Entry
Rmet_5341 CDS
T00351
Name
(GenBank) putative adhesin/hemolysin (HecA 20-residue repeat x2)
KO
K15125
filamentous hemagglutinin
Organism
rme
Cupriavidus metallidurans
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rme00536
]
Rmet_5341
Glycosaminoglycan binding proteins [BR:
rme00536
]
Heparan sulfate / Heparin
Microbial pathogens
Rmet_5341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
TPS
ESPR
Fil_haemagg
Motif
Other DBs
NCBI-ProteinID:
ABF12200
UniProt:
Q1LCC6
LinkDB
All DBs
Position
megaplasmid:complement(2053616..2062630)
Genome browser
AA seq
3004 aa
AA seq
DB search
MNTNLHRLVFNAARGMLVAVQESAANRGKGRHTGSGMPAARAATVHFALPAITLGVWMAI
GVPVKAVAQIVADPNAGAHRPTVGQTANGLPQVDITRPSAAGVSLNQYSQFDVNKPGVIL
NNSPAIIATQQAGYINGNANLLPGQGARIIVNQVTGTMPSHLQGYVEVAGARSEVVIANP
NGLMVNGLGFINTSRATLTTGTPVFGGSGSLDAFRVTGGQILVQGAGMNAANVDQVDLIA
RAVQANASLYANRLNVIAGANQVDHDTLGITPIAGAGPAPAQGIDVAQLGGMYANKILLA
STEQGVGVSLRGIAAAQAGDLTLTTQGKLVLAGQTNASGNLTAHARDGIDNYGTTYATQA
VSLDTDGVLSNTGTLAAQQRLDARGGTVDSTGTLAAGVNQDGTVAAPADLVVSATHALTA
TGRNQASGNATLRAGNVTLAGSQTSAGGNLDLTASAGDLDLTGATNTAGAGLTANASGAV
VNDRGQMSSRGATTLTAGSVSNAGGQLVSQGAMTLQSAGVINNGQGTVQAGGALNASAAS
LDNTGGRIASLNADGLSVGVTGTLTNVPGTTATGAQGGVIGGNGNVRVVAGDLVNHGQIS
AQGDASLQAAALDNSSGSLTAGGALDATIAGSLNNRQGTISGASTSLAAQSLDNSAGLIE
GNQLAMRTSADLLNLGGKIHQFGQTDTTIAAGGTLDNTGGSIAANGQSLTVQGGTLVNDS
GKISHAGAGLLTVQADGALRNAQAAIQTNGDLRMQAASLDNTQGILSAQRATTLASAGDL
VNRQGSIYGQTGLTLTSGGNLDNTTGSAQTAGDLSVTATGALTNTGGTVAANGAHGHATI
AAASVDNTRGKMVNAGDGATAITATTSLINTAGKLGGNGDVSLRAATFANNADGAGDGAG
AATAAGGALDLKVSGQVDNRGGSLSGSKGLTLDQAGVTLNNDGGQVLGGTDVRLGTASMT
NAGGAVNANQDIAVTGALSGSGTVQAGRDLSVEVTGDYTNDAANNLRADGDMRVSATGTL
TNTGTLAAAGGLTVKGADIVNAAGAGMNSATTQVNAADTLTNAGRIEGNSVSTNATTTNT
GTIIGNTVTMQGQDIVNEGASALMAAVKQLNVYATGSVRNLDGANLYSAGNLRIARDGTR
DPVSGMLVNQVDTLINSSATIQAEGDIDIAANQVVNKRTRIVTEAGTPVVTASKTLTTWF
AGLTGIDQMIHISLTFPDWSWSNSMAPVFTNQINALRAPLTVTVEKSTVTNLNTANQTLS
FTTPPTEAIIGQTECTPGPCTRALTGNPTQYYQSLTDNGTSYSITFWPDWDPSINIRPDQ
VRQANFGHDYNEISRTSTTTTATDRLVSATPAALMQSGGTMRINSNGGDILNQSSTIAAG
GDLTRSAVGGTILDTGTVLQQTVATQDTSTFYWHQSNGPNSDTQVVAYPTTPAASTTIEA
LPAITSANKAVQTTAQTIDVATVDPLGQTVTGSSLTGGIKGGGATGTQAGGASGSQGKPT
QTLGTAQGGIPNLTLPTNGLYRYQPAPGSTYLIATDPRFTQYARFISSDYMLGQLGLDPL
MTQKRLGDGLYEEKLIRDQVTQLTGRTYLAGFSNNLDEYQRLMDNGVQYARSFSLTPGIG
LSDAQMAQLTTDMVWLVSQDVTLPDGTRQTVLVPKVYLAQASTVNLQDTGALVSGNTVSM
NATGDLSNSGRIVGDLATQVIGANIVNRGVVGGTGTTVVVAQQDVRNLGGRITGTDTLVS
AGRDVINASQTITNTNTLANGNSASATAVGSVASIGGTSNVAVLAGRDINMAGGDVNAGS
TASLVAGRDLNLRTVATGTTQDATANGAQDWLRNQTTTGVGSSVQAGSNVAAVAGRDATL
SGSLIDAGGNATLLAGRDVAVTAAMDTQTHDSGAFSNKQSQFTQSWYDETARGSAVQAGN
NATLGAGQSATVNQVLQANGISPAADAMGGTGNLTVLGSSVSTGAANGGGGTAGLIATGD
VNIGTVNETHASDSWSQSRSSGFLSKSETTRESSSRESTAVGSVVSAETVTGSAGRDLTV
SGFTMAATKDLTLDAGRDLTITTAESTSSSHSFERTTSTGFGAAGAGISYGKRETKDTVN
DNAVTHTGSLVGSTEGNVSLQAGNTLRVTGSQVIAAKDLSGVGADVVIEAARGMAHHDET
HEVKQTGFTLGVGGGAIGSAINAGQKAGAATKSQDGRASALWGIAAGRDAYDAAMGAGDA
VKSLADGKGPVGTALTLSFGTSQSKQTLTQDSTTHTGSNIQAGGTATFIATGVDAAGNKT
AGNLDIIGSDIAANKVGLDAKGDVNIVSATDTYESRSTNKSSSGSIGVSVSAAGFGVSAS
ASTSKGHADGTGTTQVNSHVSGSESVSIVSGKDTNLLGGVVSGGKVSADVGGNLNLASRQ
DTEDSEARQQSVGGGIGWSQGAGLSGSFTASMGKGDGKYANVNEQTGIRAGEGGFDLDVK
GNTDLKGAVIASTASPDKNRLSTGTLSWSDMENQSDYSATSLGVSGGFTFGPKVEDKNSG
PTSGRNTGGVSPMIPQHESGSQRGVAQSGVAAGTIVINDEANQKQDVATLNRETSNTNTT
VGKNPDLANVLGKQADMMAAAQAAGEAVAKTVGDIAGSKERAALAKAKEASDAGNQALAQ
QYRDEAAQWEEGGANRAALHAAGGALIVGLGGGNAVAGAAGAGAASLAGKTLNELSQTIA
SSVGSGNADLNEAIGNLVSNVAAGGIGLAVGGGSGAATAANVDRFNRQLHPDEKAKIQAQ
ANGDKVAEERLTKAACYEVKCWAEYPVSSDAYNKNYVSAVEASQLGPELDWVRQQQQANL
FAYTPTQKAGDAIQSDPLGVAKNAAKIVIGGVTAKTGATICGTTGIGCVLGGGGMVAFGL
SDAGEGIGGLYNRFNGINSPGTNILRYGFDQLSPTWGTTAYDGLNLFFSVGAMRAQVPLK
MGVADGLGRPSSMFDVTVPRFNNPTLVPVINKALPNGTSQTILLFGAGAKGATLVNDATK
AGTQ
NT seq
9015 nt
NT seq
+upstream
nt +downstream
nt
atgaataccaatctgcaccgcctcgtgttcaacgcggcgcgtggaatgctggtggccgtg
caggaaagtgcggccaatcgaggcaagggccgtcacaccggcagtggaatgccggcggcg
cgcgccgccaccgtgcattttgcattgccggcgatcacgctgggcgtgtggatggcaatc
ggggtgccggtaaaggccgtggcgcagatcgtggccgatccgaatgcgggcgcccatcgt
ccgacggtcggacagaccgccaatggcctgccgcaagtcgatatcacgcgtccttccgca
gcaggggtctctcttaatcaatattcgcaattcgatgtcaacaagcccggcgtcattctc
aacaattcgccagctatcatcgcgacacaacaagccggctatatcaacggcaatgcgaat
ctgctgccaggtcagggtgcacgcattatcgtgaaccaggtgaccggcacgatgccaagt
cacttgcagggttatgtcgaggttgccggcgccagatcggaagtcgtgatcgccaatccc
aatggcttgatggtcaatggcctcggtttcatcaataccagccgcgcgacgttgacgacg
ggcacgccggtattcgggggcagtggcagtctcgacgcattccgggtgacgggcggccag
atcctggtgcagggcgcgggcatgaacgccgccaatgtcgatcaggtggatctgatcgca
cgtgccgtgcaggcgaatgcctcgctgtatgccaaccggctcaatgtgatcgccggtgcg
aatcaggtggaccacgacacgctgggtatcacgccgattgctggcgcaggccccgcacca
gcgcagggtatcgacgtggcgcaactgggtgggatgtacgccaacaagatcctgctcgcc
tcgacggagcagggcgtaggcgtgtccctgcgtggcatcgccgccgcgcaggcgggcgat
ctgactttgactacgcaaggcaaactggtgctggccggtcagaccaatgcaagtggcaac
ctcaccgcccacgcgcgcgatggtatcgacaattacggtaccacctacgccacgcaagcc
gtctcgctcgataccgatggtgtgttgagtaacaccggcacactcgccgcgcagcagcgg
ctcgatgccaggggcggcactgtggactcgacgggcacgctggcggcaggcgtgaatcag
gatggtacggtggccgcgccggcggacctggtggtgtcggccacccacgcgttgaccgcc
acggggcgcaatcaggccagcggcaatgccacgcttcgagcggggaacgtgactttggcc
ggcagtcagacttctgcgggcggcaacctggatctgacggcctcggcgggcgatctcgac
ctgacgggcgctacgaatacggcgggcgctggattgacggccaatgcgtcgggcgccgtc
gtgaacgaccgtggtcagatgtcgagtcggggtgcgaccaccctgacggcgggcagcgta
tcgaatgcaggcggccagctcgtttcgcagggggcgatgacgcttcagtcggcgggggtg
atcaacaatggccagggcacggtgcaggcaggtggggcactcaacgcctcggcggcatcg
ctcgacaatacgggcgggcgtatcgcatcgctgaacgctgatggcctgtcggttggcgtc
accgggacgctgaccaacgtgccaggcacgaccgccaccggcgcgcagggtggagtgatc
ggcgggaatggcaacgtgcgcgtcgttgccggcgacctcgtcaatcatggccagatcagc
gcgcaaggggatgcatcgcttcaggctgccgcgctcgacaacagcagtggcagcctcacg
gcgggcggcgcgctcgacgcaaccatcgcaggcagcctgaacaaccgacagggcacgatc
tccggggcgagtaccagccttgccgcccagtcgctggacaatagcgcgggcctgattgaa
ggcaaccagctcgcgatgcggacgagcgcagacctgctcaaccttggcggcaagatccat
cagttcgggcagaccgatacgaccatcgccgcgggtggcacgctggacaacacgggcggc
tcgatcgcggccaatggccagagcctgaccgttcagggcgggacgctcgtcaatgacagc
ggcaagatctcgcacgctggcgcgggccttctgaccgtgcaggccgatggcgcacttcgc
aatgcccaggccgcgatccagaccaacggcgacttgcgcatgcaggcggcgtcgctggat
aacacgcaaggcattctctcggcacaacgtgccacgacacttgcgagcgcgggcgatctc
gtcaatcgccagggcagcatctatggccagacaggcttgacgctgaccagcggcggcaat
ctggacaacaccaccggctcggcgcaaaccgctggcgatctgtcggtcaccgccaccggg
gcgctgaccaatacgggcggcacggtggcggccaacggcgcccacgggcacgccacgata
gcggcggccagcgtggacaacacgcgcggcaagatggtcaacgcgggtgatggcgcgacg
gccatcacggccacgacatcgctgatcaacacggcgggcaagcttggcggcaacggtgac
gtgagcttgcgcgcggcgacattcgcgaacaatgccgatggggccggcgatggcgccgga
gcagcaacagcggcaggcggcgcgctcgatctgaaggtgtcgggtcaggtcgacaatcgc
ggcggcagcttgtccggcagcaagggcctgacgctcgatcaggctggcgtgacactgaac
aacgacggcgggcaggtgctcggcggtacggacgtcaggctcggcacggcgtcgatgacc
aatgccggtggcgcggtcaatgccaaccaggacatcgccgtgaccggcgccctctctggt
agcggcacggtgcaggccgggcgcgatctgtcggtcgaggtgaccggcgactacaccaat
gatgccgcgaacaacctgcgtgccgatggcgatatgcgtgtatcggccactggcacgctt
accaacaccggcacgctggcggccgccggcgggctgacggtcaagggcgccgacatcgtc
aacgccgccggcgcgggcatgaacagcgcgaccacgcaggtgaatgccgccgatacgctc
actaacgccggccgcatcgagggcaactcggtcagcaccaacgccacgacgaccaacacc
ggcaccatcatcggcaacaccgtgacgatgcaaggccaggacatcgtgaacgaaggcgca
tcggcgctgatggcggccgtcaagcagctcaatgtctacgcgaccggctcggtgcgcaat
ctcgatggcgcgaacctgtacagcgcgggcaacctgcggatcgcgcgggacggcacgcgc
gatccggtctcgggaatgctggtcaaccaggtggacacgctgatcaacagctcggcgacg
atccaggccgagggcgacatcgacatcgcggccaatcaggtggtgaacaagcgcacgcgc
atcgtgacggaggcggggacgcccgtggtcacggccagcaagacgctgacgacgtggttc
gccgggctaaccgggatcgatcagatgattcacatcagtctgactttcccagactggtcg
tggtcgaattcgatggcaccggtcttcacgaaccagatcaacgccctgcgcgcacccctc
acggtcacggtggaaaaatcgaccgtgacgaacctgaatacggccaatcaaacgctgtcg
tttacaaccccgcctaccgaggcgatcatcggtcagaccgaatgcaccccgggcccttgt
acccgtgcgctgaccggcaacccaacgcagtactaccaatcgctcaccgacaacggcacg
agctacagcatcaccttctggccggactgggacccgagcatcaatattcggccggatcag
gtgcgtcaggcgaacttcgggcacgactacaacgagatctcgcgcacgagcaccaccacg
accgccacggaccggctcgtgagtgccacgcccgccgccctgatgcagtcgggcggcacg
atgcgcatcaatagcaacggcggtgacatcctgaaccagtcgtccaccatagcggctggc
ggtgacctgacacgcagcgcagtgggtggcaccattctggacacgggcacggtgctgcag
cagaccgtggccacgcaggatacctcgaccttctactggcaccagtccaatggtccgaat
agtgatacgcaggttgtggcctatccgactacgccggccgcttcgaccacaatcgaggcg
ctgccggccattacttcggcaaacaaagccgtacagaccactgcgcaaaccatcgatgtt
gcaaccgtcgatccgctggggcagaccgtcacaggcagcagcctaacgggtggcataaag
ggcggcggcgcaacggggacgcaggccggtggcgcgtcgggtagccagggcaagccgacg
cagacccttggcaccgcgcagggcggtatcccgaacctcacgctgccaaccaacggcctt
taccgataccagcccgcgccaggatctacctacctgattgcgactgatccgcgcttcacg
cagtacgccaggttcatctccagcgactacatgctcggtcaactcgggctggatccgctg
atgacgcaaaagcgtctcggtgatggcctctatgaagagaagctgatccgggaccaggtc
acgcaactgacgggccgtacgtatctggccggcttcagcaataacctcgacgagtaccag
aggctgatggacaacggcgttcagtacgccagatccttcagtctgacgcccggcatcggc
ctgtctgacgcgcaaatggcgcagcttacgaccgacatggtgtggctggtcagccaggat
gtgacgctgcccgatggcacgcgccagacggtgctggtgcccaaggtctatctcgcgcag
gcaagcacggtgaacctgcaggacaccggcgcgctggtcagcggcaacacggtgagcatg
aacgccactggcgacctgtccaacagcggcaggatcgtgggcgatctggcgacacaggtg
attggcgcgaacatcgtcaatcggggcgtggtgggcggcacgggtacaacggtcgtcgtt
gcgcagcaggatgtgcgcaaccttggcggacggatcaccggcaccgacacgctcgtatcg
gctggccgagacgtgatcaacgcctcgcaaacgatcaccaacaccaacacgttggccaat
ggcaacagcgcaagcgctactgccgtcggctccgtggcttccatcggcggcacgagcaac
gtggcggttctggcagggcgagatatcaacatggccggcggcgacgtcaatgcgggaagc
actgcgtcgcttgtggctggccgtgacctgaacctccgtactgtggctacgggtacaact
caggatgccaccgcgaatggcgcacaggactggctgcgcaaccagaccacaaccggcgtc
ggtagctcggtgcaagccggcagcaatgtggccgccgtcgctggccgcgacgccacgcta
tccggttcactcatcgacgccggcggcaatgccacgctgctggcgggccgcgatgttgcc
gtgaccgcggccatggacacgcagacccatgactccggcgccttcagcaacaagcagtcg
caattcacgcaatcgtggtacgacgagacagcgcgaggcagtgccgtccaggccggcaac
aatgcgacgctcggggccgggcagtcggcgacggtgaatcaggtgctgcaggccaacggc
atctctcccgctgccgacgcgatgggtggcacaggcaacctgaccgtgctcggctcatcg
gtcagcacgggcgcagccaatggcggcggcgggactgcgggcctgatcgccacgggagac
gtcaacatcggtacggtcaacgagacgcacgcgtccgacagctggtcgcaatcgcgctcg
tcgggctttctctcgaaatcggagaccacgcgcgagtcgagttcgcgcgaaagtaccgcg
gtgggctcggtggtctcagccgagaccgtgacgggcagcgcggggcgagacctgacagtc
agtggctttaccatggctgccacgaaagacctgacccttgacgccggtcgcgatctcacg
attacgacggcggaaagcacgagttcgagccacagcttcgagcgcacgacatccacgggc
ttcggcgctgccggcgcaggcatctcctacggcaagcgggaaaccaaggacaccgtcaac
gacaacgccgtgacgcacaccggcagcctggtcggcagcacagaaggcaatgtcagcctg
caggccggcaatacgctgcgcgtgacgggtagtcaggtgatcgccgcgaaggatctgagc
ggggtgggtgccgatgtcgtgatcgaagcggccaggggcatggcacaccacgacgaaacc
cacgaagtgaagcagaccggcttcacgctgggcgtgggcggcggcgcgatcggttcggcc
attaacgcggggcagaaggcgggggccgcgacgaagagccaggacggccgcgcgtcggcg
ctctgggggatcgcggcagggcgggatgcctacgacgcggcgatgggtgcaggggatgcc
gtcaagagcctggccgatgggaagggtccggtgggcacggcgctcacgctgtcgttcggc
accagccagagcaagcagacgctgacgcaggacagcaccacgcacacaggatcgaacata
caggcaggcggcacggccacgttcattgccacgggcgtggatgctgcggggaacaagacc
gctggcaatctggacatcattggctcggacatcgcggccaacaaggtcgggctcgacgcc
aagggcgatgtgaacatcgtgtcggccactgacacgtacgagagccgcagcacgaacaag
tcgagcagcgggagcatcggggtgtcggtcagcgcggcgggcttcggggtctcggcatcg
gcctcgaccagcaagggccatgccgatggcacgggcacgacgcaggtcaacagccacgtg
agcggcagcgagtccgtgtcgatcgtatcgggcaaggacaccaaccttctgggtggtgtc
gttagcggcggcaaggtatcagccgatgtcggcggcaacctgaacctcgcgagccgtcag
gacaccgaggacagcgaggcccgtcagcagagcgtgggtggcggtatcgggtggagccag
ggcgctgggctctcgggatcgttcaccgcgtcgatgggcaagggcgacggcaagtacgcc
aacgtgaacgagcaaacggggatccgggcgggcgaaggcggcttcgatctcgatgtgaag
ggcaacacggacttgaagggggcggtgatcgcgagcacggccagcccggacaagaaccgg
ctgtccacgggcacgctgtcctggagcgacatggagaaccagtcggactacagcgccacg
tcgttaggggtgagtggtggcttcaccttcgggccgaaggtggaagacaagaactcgggt
ccgacgtcgggcaggaacaccggcggcgtgagcccgatgattccgcagcacgagagcggc
agccagcggggcgtggcgcaatcgggcgtcgcggcgggcacgatcgtcattaacgatgag
gcgaaccagaagcaggacgtggcgacgctgaaccgggagacgtcgaacacgaacacgacg
gtgggtaagaacccggatctggccaacgtgctgggcaagcaggccgacatgatggcggcg
gcgcaggcggctggggaggcggtggcgaagacggtaggggatattgcggggagcaaggag
cgggccgcgctcgcgaaggccaaggaagccagtgacgcgggcaatcaggcgttggcgcag
cagtatcgggatgaggcggcgcaatgggaggagggcggagcgaatcgcgcggcactccat
gccgcgggcggcgcgctgatcgtggggctgggcggcggcaatgcggtcgcgggtgcggca
ggtgcgggcgcggcttcgctggcgggcaagacgctgaacgaactgagccagacgatcgcc
agcagcgtgggaagcggcaatgccgatctgaacgaggcgattggcaatctggtgtcgaac
gtcgcagcgggcgggattgggttggcggtgggaggcggatcgggggctgcgacagcggcg
aatgtggatcggtttaatcggcagttgcatccggatgagaaggccaagatacaggcgcaa
gcgaatggggacaaagtcgcagaagaacgattgaccaaggcggcatgttacgaagtgaaa
tgctgggctgaatatcccgtcagcagcgatgcctacaacaagaactacgtgagcgcggtt
gaagcatcgcagcttgggcccgagctggattgggtgcgtcagcaacaacaagcgaacctg
tttgcctatactcccacgcagaaggcgggggatgccattcaaagcgatcccttgggcgta
gcgaagaatgcggccaaaattgtaatcggcggcgtaacggccaaaacgggagccaccata
tgtggcactaccggaattggatgtgtacttggcggcggtgggatggttgcatttgggctc
agtgatgccggagaggggatcggtggtctttacaaccgattcaatgggataaactctcca
ggaactaacatccttagatatggttttgatcaattgagcccgacatggggaacgacggcc
tatgatggccttaacctgttcttcagtgttggggcgatgcgggcgcaggtccctttgaag
atgggggttgcagatgggcttggacgcccgagttccatgtttgatgttacggttccaagg
tttaataatccaacgctagttcctgtcattaacaaggcattaccaaatggaacctcgcag
acaattctgctatttggtgctggtgccaagggtgctacgttagtcaatgatgcaactaag
gcaggaacgcaatga
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integrated database retrieval system
