Cupriavidus metallidurans: Rmet_5827
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Entry
Rmet_5827 CDS
T00351
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme00061
Fatty acid biosynthesis
rme00071
Fatty acid degradation
rme01100
Metabolic pathways
rme01212
Fatty acid metabolism
rme02024
Quorum sensing
rme04146
Peroxisome
Module
rme_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rmet_5827
00071 Fatty acid degradation
Rmet_5827
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rmet_5827
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rmet_5827
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rme01004
]
Rmet_5827
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rme04147
]
Rmet_5827
Enzymes [BR:
rme01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rmet_5827
Lipid biosynthesis proteins [BR:
rme01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rmet_5827
Exosome [BR:
rme04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rmet_5827
Exosomal proteins of breast cancer cells
Rmet_5827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DNA_pol3_theta
Motif
Other DBs
NCBI-ProteinID:
ABF12686
UniProt:
Q1LAZ0
LinkDB
All DBs
Position
megaplasmid:complement(14159..15715)
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AA seq
518 aa
AA seq
DB search
MYLTQGLHRRVQQTPDHVATIFRSRRRTYREFSERVSRLAGALQQLGMNPGDRVSMLSLN
SDRYLEYAMSVWWGGGVLNPVNTRWSVPEIVYSLDDCDTGILIVDDHFLAMAEPIRATAK
RAPILIHAGDGAPPAGMLGFEALLADASPVPDAMRGGEDLASIMYTGGTTGKPKGVMQSH
LNLWSSSISRLAQFPLDEATITLHAAPLFHTAAMAKAVGVFVIGGTHTMVPTFDPAEVLE
TLERERVNDIMLVPTMLQAILACPDFARRDVSSLKRINYGASPINGAVLDAALAAMPNVE
FSHAYGLTEASPVVSVNPPANHGPVGRASGLYRSAGRPGFGVFVKVVDPNGDEVPRNTIG
EIIVRGPNIMQGYWNKPEETRQALRNGWLHTGDGAYMDDAGYLFIVDRIKDMIVTGGENV
YSAEVENALAQHPAVHSCAVIGVPHERWGEAVHAVVVLRPGLQAGEDELRTHCRALIASY
KCPKSVEFRTELPLSAAGKILKRDLRTRYWQDQPRQVS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgacccagggcctacaccgtcgtgtgcagcagacgcccgaccacgtcgccacg
atattcagaagccgccggcgtacctatcgtgagttctccgagcgtgtctcgcgcctcgcc
ggcgccttgcagcaactcggcatgaacccaggcgaccgcgtcagcatgctgtccctgaac
tcggaccgctatctcgaatacgcaatgagcgtgtggtggggcggtggcgtcctcaatcca
gtcaacacgcgctggagcgtgccggaaatcgtctattcgctcgatgactgcgataccggc
atcctgatcgtcgacgatcattttctggccatggccgagccgattcgcgccacggcgaag
cgggcaccgattttgattcatgcgggcgacggcgcgccgccggcaggaatgctgggattc
gaggccctgctcgcagacgcgagccctgtaccggacgccatgcgcggcggcgaggatctg
gcctcgatcatgtacacgggcggcaccaccggcaagccgaagggtgtcatgcagtcgcac
ctgaacctgtggtcgtcgtcgatctcgcgcctcgcccagttcccgctggacgaagcgacg
atcacgctccacgcggcaccgctgttccatacggcggcgatggccaaggcagtgggtgtg
ttcgtcatcggcggcacgcacacgatggtcccgacgttcgatccggccgaggtgctggaa
acgctcgaacgcgagcgcgtcaacgacatcatgctcgtgcccacgatgctgcaggcgatc
ctggcgtgcccggacttcgccagacgcgatgtcagcagcctgaagcgcatcaactatggc
gcgtcaccgatcaacggcgcggtgctcgatgcggcgctggccgccatgccgaatgtcgag
ttctcgcacgcctatgggctgaccgaagcgtcgccggtggtatcggtcaatccgcctgcc
aaccacggcccggtgggccgcgccagcgggctgtaccggtcggcgggccgccccggcttc
ggtgtgttcgtcaaggtcgtcgacccgaacggcgatgaagtcccacgcaacacgatcggc
gagatcatcgtgcgcggccccaacatcatgcagggatactggaacaagccggaggaaacg
cggcaggcactgcgcaacggctggctgcatacgggcgacggcgcatacatggacgatgcc
ggctatctgttcatcgtcgatcgcatcaaggacatgatcgtcaccggcggcgagaacgtc
tattcggccgaggtcgagaacgcgctggcccaacatccggcagtccattcctgcgcggtc
attggcgtgccgcacgagcgctggggcgaagcggttcacgcggtggtggtgctcagaccc
ggcttgcaggctggcgaggacgaattgcgcacgcattgccgcgcgctcatcgccagctac
aagtgccccaagagcgtggagttccgcaccgagctgccgctctccgcagcgggcaagatc
ctcaagcgcgacctgcgcacgcgctactggcaggaccagccgcggcaggtcagctga
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