Cupriavidus metallidurans: Rmet_6220
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Entry
Rmet_6220 CDS
T00351
Symbol
sbcD
Name
(GenBank) DNA repair exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
rme
Cupriavidus metallidurans
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rme03400
]
Rmet_6220 (sbcD)
DNA repair and recombination proteins [BR:
rme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Rmet_6220 (sbcD)
Archaeal homologous recombinant proteins
Rmet_6220 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ABF13079
UniProt:
Q5NUY1
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All DBs
Position
pMOL28:complement(71484..72932)
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AA seq
482 aa
AA seq
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MLEDGESLLAAHFSDLHYSPGHLAEADRCFGFAVEDAIANRCRVAVVSGDSTDHRLDAHT
PALSALARRIHQLSVHMPVVMLQGTFSHEPPGTLDLFRLIGASFPVYVADRIHQVALVGR
TFIPSDGAIFSHAEMDKLLTQQGLPDVVFTCVPTVNKAVLAAAAGVANAATAVGDHLADY
LAAAGTVNRQWRSHGVRTIGVSHGTVNGCQTEHGVPMAGLDHEFTIGALFEAHCDAFMLG
HIHRAQQWEREGRVVAYPGSIGRFHYGEIGAKGYLQWQVSPGEAVAIPVKTPASETVCID
FDGPPDMAKLAEMAADAAHKFVRVRWTVNEEHRQLVDREAIEALFVGSAEVKLEARVLPA
VRSRAEGISRAATLSAKLGRWCELTGVDANPLLDSLSMLQNLEAQAIADQVLAGLDEMSM
PVTQKVGAVEAVAPPFVAKLTDMELEEPSAAPEAFPVAAAEPVAPIATASAPMNWLTDDL
FA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagatggcgaaagcctgttggctgcgcatttctctgatttgcactactcccct
ggtcatttggccgaggcagatcgttgctttggctttgcggtggaggacgcgatcgcaaat
cgttgccgggttgccgtggtgtcgggcgactcgaccgaccaccggttggatgcccacacg
ccggcgctctccgcgctggcgcgacgcattcaccagctatccgtgcacatgcctgtggtg
atgcttcaaggcaccttcagccacgagcccccaggcacgctggatctgttccgactgatc
ggcgcaagcttcccggtatacgttgcagaccggattcaccaggtcgcgctcgttggccgg
acattcattccgagcgatggcgcgatcttcagccatgcggaaatggacaagctgctgacc
cagcaagggctaccagacgtcgtcttcacctgcgtacccacggtcaacaaggcggtgctg
gcggccgcggccggcgtggcaaacgccgcgacggcggttggcgaccacctggctgactat
ctggctgccgcgggcactgtgaatcgtcaatggcgctcacacggcgtccgtacgatcggc
gtttcccacggcaccgtcaacggttgccagacggagcacggcgtgccgatggccggactc
gaccacgagttcactatcggggcactgttcgaggctcactgcgacgcgttcatgctcggc
cacattcaccgtgcccagcagtgggaacgtgagggcagggtggtggcctatcccgggtct
atcggacggttccactacggcgaaatcggcgcgaaaggctatcttcagtggcaggtatct
ccgggggaggcagtggctatcccggtgaagacacccgcgagcgagaccgtctgcatcgac
ttcgacgggccgcctgacatggcaaaacttgccgagatggccgcggacgcagcgcacaag
ttcgtgcgggtgcggtggacggtcaatgaggagcatcgccaactggtcgatcgcgaagcc
atcgaggcgctttttgtcggcagtgccgaggtcaagctggaagcacgtgtcctgccggct
gttcgcagccgcgctgaaggcatcagccgggcggccactttgtccgcaaagctgggacgt
tggtgcgaactgaccggtgtcgatgcaaatccgttgctggacagtctgtcgatgctccaa
aacctcgaggcccaggcgatagccgatcaggtgctggctggccttgatgaaatgtccatg
cccgttacgcagaaggtcggcgccgtagaagctgttgcgccaccgttcgttgcgaagctg
acggacatggagctcgaggaaccgagcgccgcacccgaggcattcccggtcgcggcggcg
gagccagtagcgcccattgccactgcgtcagcaccgatgaactggctgaccgacgatctt
tttgcgtag
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