Cupriavidus metallidurans: Rmet_6397
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Entry
Rmet_6397 CDS
T00351
Symbol
hupB
Name
(GenBank) DNA-binding protein Hu-beta (bacterial histone-like DNA-binding protein)
KO
K03530
DNA-binding protein HU-beta
Organism
rme
Cupriavidus metallidurans
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rme03032
]
Rmet_6397 (hupB)
03036 Chromosome and associated proteins [BR:
rme03036
]
Rmet_6397 (hupB)
03400 DNA repair and recombination proteins [BR:
rme03400
]
Rmet_6397 (hupB)
DNA replication proteins [BR:
rme03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Rmet_6397 (hupB)
Chromosome and associated proteins [BR:
rme03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Rmet_6397 (hupB)
DNA repair and recombination proteins [BR:
rme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Rmet_6397 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
ADC45367
UniProt:
D3DYJ7
LinkDB
All DBs
Position
pMOL28:complement(125096..125530)
Genome browser
AA seq
144 aa
AA seq
DB search
MTKSELIDAVARGVDGLTKTKAEQVLNATLDAIVEAVGRGETLSLIGFGTFSKGERGERM
ARNPRTGEEIRVEAAKTVKFKAGQRFKDAVNGGRWPVTRCMRPPHNTCRSRSCSPAPRRS
RNASMRRRSDIAASLAMSMACSMV
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatctgaactgattgacgccgttgctcgcggtgtcgacggtctcacgaagacc
aaggccgagcaagtcctcaatgcaacgctcgatgccatcgtcgaggcggtaggccgcggc
gaaaccttgagcctgatcggcttcggtaccttcagcaaaggcgagcgtggcgaacgcatg
gcgcgcaatccgcgcaccggcgaggaaatccgggtcgaggcagccaagaccgtgaagttc
aaggcgggccagcgattcaaggatgcggtcaatggtggccggtggccggtgacgcgatgc
atgcgccctccccacaatacgtgccggtcgcggagctgctcgccggcaccgcggagatcc
cgcaacgcctcgatgcggcgacgatccgatatcgcggcgtcacttgccatgtctatggcg
tgctccatggtctga
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