Rossellomorea marisflavi: D5E69_01575
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Entry
D5E69_01575 CDS
T07410
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rmf
Rossellomorea marisflavi
Pathway
rmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D5E69_01575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmf03019
]
D5E69_01575
03009 Ribosome biogenesis [BR:
rmf03009
]
D5E69_01575
Enzymes [BR:
rmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D5E69_01575
Messenger RNA biogenesis [BR:
rmf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D5E69_01575
Ribosome biogenesis [BR:
rmf03009
]
Prokaryotic type
rRNA helicases
D5E69_01575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
GRP
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QHA38319
LinkDB
All DBs
Position
292239..293696
Genome browser
AA seq
485 aa
AA seq
DB search
MGFEEATPIQASTIPVSLEGKDIIGQAQTGTGKTTAFGIPMIEKIDVKNPAVQGLIIAPT
RELAIQVSEELYRISADKRARVLSVYGGQDIQRQIRAMKKNPHIIVGTPGRLLDHIKRKT
LNLTNVHTLVLDEADEMLNMGFIDDIESILETVPPTRQTLLFSATMPDPIRRIAERFMTE
PEVIKVKSKEVTVSNIEQFFTKVTEKEKFDVLSRLIDVQSPELAIVFGRTKRRVDELSRA
LSIRGYLAEGIHGDLSQARRMTVLKKFKEGRIDVLVATDVAARGLDISGVTHVYNFDIPQ
DPESYVHRIGRTGRAGKKGMSITFVTPREMGYLKVVEQTTKKKMTALKPPSHNEALEGQQ
RLALEKLTEATKESDLKDYYALAEEFLANHESIEAVAAAIRVLTKEPDTTPVEITEERPL
PSRGGGRGNSRGGGYKGGSRSGKGGSGGSRSGGYNRGGGSSRGGDRNRSGGSRPQSSSKR
KSYNS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgaagaagcaactcccatccaggccagcacgatcccggtaagtcttgaagga
aaagacatcatcggtcaagcacaaacaggtacaggtaagacgacggcattcggtattccg
atgatcgagaagatcgatgtaaagaacccggcagtccaaggtcttatcatcgccccgaca
cgtgaacttgcgatccaggtttcagaagaactataccgcatcagtgcagataagcgcgca
cgcgtcctttctgtatacggcggtcaggatatccagcgccagatccgtgcgatgaaaaag
aacccgcacatcatcgttggaacgccaggacgtcttcttgaccacatcaagcgtaaaaca
ttgaaccttacaaatgttcatacccttgtattggatgaagcggacgaaatgctcaacatg
ggcttcatcgatgacatcgagagcatccttgaaaccgttcctccgactcgtcaaaccctt
ctattctcagcaaccatgccggatccgatccgtcgcatcgctgagcgtttcatgactgaa
cctgaagtcatcaaagtgaaatcgaaagaagtgactgtatccaacatcgagcagttcttc
acaaaagtgaccgagaaagagaaattcgacgttctttcacgcttgatcgacgttcagtct
cctgaacttgccatcgtattcggacgtacgaaacgccgtgtagatgagctttcccgtgca
ttgagcattcgtggttaccttgcagaaggaatccatggtgacctttcacaggctcgccgt
atgacggtccttaaaaagttcaaagaaggacgcatcgacgttcttgttgctactgacgta
gcggctcgtggacttgatatctctggtgtaacgcatgtatacaacttcgatatcccacaa
gatcctgaaagctacgttcaccgtatcggacgtacgggccgtgcaggtaagaaagggatg
tccatcacattcgtcactccacgtgaaatgggctaccttaaagtagtagaacaaacaacc
aagaagaaaatgacggctcttaagccacctagtcataacgaagctcttgaaggtcagcag
cgcctggctcttgaaaagcttacagaagcaacgaaagaatctgatcttaaagattactat
gcgttggctgaagaattccttgcgaatcatgaatccatcgaagcggtggcagcggccatc
cgcgttctgacaaaagaaccggataccactccagtcgaaatcaccgaagaacgcccactt
ccatcaagaggcggcggtcgcggtaattcccgaggcggcggatacaaaggtggttcacgc
tctggtaaaggcggaagcggcggaagccgttcaggcggttacaaccgtggcggcggttca
tcccgcggcggagatcgcaaccgttcaggcggaagcagaccacaatcttcttctaagcgt
aaatcatataattcttaa
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