Rossellomorea marisflavi: D5E69_02105
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Entry
D5E69_02105 CDS
T07410
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rmf
Rossellomorea marisflavi
Pathway
rmf03420
Nucleotide excision repair
rmf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rmf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D5E69_02105 (pcrA)
03430 Mismatch repair
D5E69_02105 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmf03400
]
D5E69_02105 (pcrA)
Enzymes [BR:
rmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D5E69_02105 (pcrA)
DNA repair and recombination proteins [BR:
rmf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D5E69_02105 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
D5E69_02105 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QHA34717
LinkDB
All DBs
Position
389464..391677
Genome browser
AA seq
737 aa
AA seq
DB search
MQFLTDRLLNGMNPQQAEAVKATDGPLLIMAGAGSGKTRVLTHRIAYLMVEKGVNPYNIL
AITFTNKAAREMKDRITNILGGASESIWISTFHSMCVRILRRDIDRIGINRNFTILDTTD
QQSVIKSILKDRNIDPKKFDPRSILGSISSAKNELIPTEEFAKNAGSYYDQVVSDVYTEY
QRRLRKNQALDFDDLIMTTIQLFQRVPEVLEFYQRKFQYIHVDEYQDTNRAQYMLVKLMA
SRFQNLCVVGDSDQSIYKWRGADIANILSFEKDYPRAKVILLEQNYRSTKRILQAANEVI
QKNSNRKPKNLWTENHDGEKISYFRADTEQSEAQFVTGKIKEMVDSGKRKYSDFAILYRT
NAQSRVMEEVLLKSNIEYAIVGGIKFYDRKEIKDILAYLRLISNPDDDISLQRVINVPKR
GVGATSLDKIARYAQDHDISMFTALEEADFIGLSPKITKAVVEFKEMIKGYTGMQEYLSV
TELVEEILDKSGYNDMLKAEKSIESQSRLENLDEFLSVTKEFEKSNEDKSLVAFLTDLAL
VADIDKLDEDDKPKDAVILMTLHAAKGLEFPVVFLMGMEEGVFPHSRSLMEEDEMEEERR
LAYVGITRAEEELYLSNAQMRTLFGQTKMNPVSRFINEIPADLLDNVMTEKKSAISFQSS
RPAARPAPRKPVSRPAPASGGAAASWQVGDKAQHKKWGTGTVVSVKGSGDGVELDIAFPS
PTGIKRLLAKFAPIEKV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttttgactgatcgattattgaacgggatgaatccgcagcaggcagaagccgtg
aaggcgaccgacgggccgctgttgatcatggcaggtgcaggctccgggaagacgcgggtg
ttgacccaccggattgcctatctgatggtggaaaaaggagtcaatccttataatatactg
gccatcacgttcaccaataaagcggcaagggagatgaaggaccggatcacgaatatcctc
gggggcgcatccgagagtatctggatctcgaccttccacagcatgtgtgtacggatcctc
agaagggatatcgaccggatcggcatcaaccggaacttcacgatcctcgatacgacggat
cagcagtccgtcatcaagtcgatcctgaaggaccgcaacatcgatccgaagaaattcgat
ccacgatcgatcctcggctcgatcagctcagcgaagaatgaactgatccctactgaagaa
ttcgcgaagaatgcagggagctactacgatcaggtcgtatccgatgtttatacggaatac
cagaggcgcctaaggaagaatcaggcactcgacttcgatgatctgatcatgacgacgatc
cagctgttccaaagggtgccggaagtgcttgaattctatcagcgcaaattccaatatatc
cacgtggatgagtatcaggatacgaacagggcccagtacatgctcgtcaaactcatggcg
tcacgcttccagaacctctgtgtcgtcggtgactccgatcagtccatttataaatggcgg
ggtgccgatatcgccaacatcctatccttcgagaaggattatccgagggccaaagtgatc
ctcctcgagcagaattaccgctcgacgaagcggatcctccaggcggcgaacgaagtcatc
cagaagaactcgaatcgtaagccgaagaacctgtggacggaaaatcatgacggcgagaaa
atttcctatttcagagcggatacggagcagtccgaagcgcagttcgtaacggggaaaatc
aaagagatggtggattccggaaagcggaaatactccgactttgccatcctgtaccggacg
aatgcccagtcccgtgtcatggaggaagttctcctcaagtcgaatatcgaatatgccatc
gtcggcggaatcaagttctacgatcgtaaagagatcaaggacatcttggcctatctgcgc
ctcatctccaatcccgatgatgatatcagccttcaaagggtgatcaacgtaccgaagcgg
ggagtgggggcgacgtccctcgataagattgcccgctatgcccaggaccatgatatttcc
atgttcacggcccttgaagaagctgattttatcggcttgagcccgaaaatcacaaaagcc
gtggttgaattcaaggaaatgatcaaaggctatacagggatgcaggaatacttgtccgtc
accgaactcgtggaagagatactcgataagtcgggatacaatgacatgctgaaggcagag
aaatccatcgaatcccagagccgtctcgagaacttggacgagttcctctcggtcacgaag
gaattcgaaaagtcgaatgaagacaagagcctggtggccttcctgaccgacctcgccctt
gtagccgatatcgacaagctggatgaagacgataagccgaaggatgccgtcatcctgatg
acgctccatgcggcgaaggggcttgagttccctgttgtcttcctgatggggatggaagaa
ggggtattccctcacagtcgatcccttatggaagaagacgagatggaggaagagcgcagg
cttgcgtatgtcggcatcacccgtgccgaggaagaactgtatctttcaaatgcccagatg
cgcacgctcttcgggcagacaaagatgaatcctgtatcgcgcttcatcaatgaaatccct
gcagacctgctggataatgtgatgaccgagaagaaaagcgcgatctccttccagtcatcc
cgcccggcagcgcgcccggcgccgagaaaaccggtttcacgtccggcaccggcatcagga
ggagctgctgcaagctggcaggtcggtgacaaagcgcagcataagaaatgggggacaggc
accgtggtcagcgtgaaaggatccggtgacggcgtcgaactcgacatcgccttcccaagt
ccaaccgggatcaagcgtctgctggcgaaattcgccccgattgaaaaagtgtga
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integrated database retrieval system
