Rossellomorea marisflavi: D5E69_07825
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Entry
D5E69_07825 CDS
T07410
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rmf
Rossellomorea marisflavi
Pathway
rmf03420
Nucleotide excision repair
rmf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rmf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D5E69_07825
03430 Mismatch repair
D5E69_07825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmf03400
]
D5E69_07825
Enzymes [BR:
rmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D5E69_07825
DNA repair and recombination proteins [BR:
rmf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D5E69_07825
MMR (mismatch excision repair)
Other MMR factors
D5E69_07825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_11
AAA_14
AAA_30
DEAD
ResIII
NACHT
nSTAND3
DUF272
SLFN-g3_helicase
CheB_methylest
Motif
Other DBs
NCBI-ProteinID:
QHA35733
LinkDB
All DBs
Position
1480163..1482421
Genome browser
AA seq
752 aa
AA seq
DB search
MTKEKPLHPDFTIEQERLDFTKRYIDVVIETSQTSKEQYKENMEKAFGDIDWGESSAAYI
DLLTNASFFEMSKEELDSLEKARSKPYFARIDFRHDGSQQFEKHYIGKTSLYQRDNQEQI
IVDWRSPIANLYYEGRIGDVSYDAEGETYTGDLSLKRQYMIEEGKLEEVRDIDLTTTDEL
LQDSLAKSSSNRLTEIISTIQEEQNRIIRADLNKPIIVQGAAGSGKTTIALHRISYFIYN
YKQFFDPSQLMILAPSNLFIDYISEALPDLGVENVRQTTFTDYVQTCLERELKLAPDDKL
IRFIESDSPGKEDLAWISGFKGSRTFRKILEQYVEEIEERFYTSKDFYVDKYKLFTAKRF
THLFKEEYTYLPVYRRITKLKSLLQNVVRSNKAEMITKVEDFFDARIEAALSRRSENRKA
YVTKALDTKLERLEELKKAIRTSVTGYMKQFERKQLDHYFKELFSDPGRLVSYSGGELSH
ERADLVCSYTLKLANKKQYESEDLAILLFLQTHLYGIDKYVKAKNIVIDEAQDYSYLQLY
ALKKALGTDMFTLVGDLAQGIHSYRGLQSWEPVYREIFPRATYTELQKSYRTTVEIMEEA
NRLLTLLPYEFPKVNPVVRHGESPVKKVVSSSEEIGDEVGHLVASGKSEGFQTFAVICKS
MKDCKAIARILEERSGLRVKLLEEQESIPKDRVVVVPSYLSKGLEFDSVVLVAMDERYDP
SNELDIKLQYVGMTRPLHQLTFISTSFDSFIG
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggaaaaaccacttcatcccgattttacaatcgaacaagaacgactcgacttc
actaaaaggtacattgacgtagtcatcgagacctcacaaacaagcaaagaacagtataaa
gagaatatggaaaaagccttcggtgatatcgactggggggaatcgagtgctgcctacatc
gatctactcacgaatgcaagcttttttgaaatgtctaaagaggagctcgattcccttgag
aaggcccgaagcaagccttattttgcccgtatcgatttccgtcatgatggatctcaacag
tttgaaaagcattatatcggaaaaacctcgctctaccagagggataatcaggaacagatc
atcgtggactggagatcgccgattgcaaacctctactacgaggggaggatcggggacgta
tcctatgatgcagaaggtgaaacatacactggcgatctttcactgaagcgccaatacatg
atagaggaaggcaagctcgaagaagtccgcgacatcgatttgacgacgacggatgaactg
cttcaggactctcttgccaaaagttcgagtaaccggctcaccgaaatcatatccaccatc
caggaggaacagaaccggatcatccgtgccgatctgaataaacccatcatcgtacagggg
gcggctggtagcggcaagacgaccattgccctccaccggatctcatacttcatctacaac
tataaacaatttttcgatccatcccagctcatgatcctcgcacccagcaatctattcatc
gactacatctcagaagcccttcccgatcttggggtggagaatgtgcggcagacgacgttc
accgactatgtacagacgtgtcttgagcgggagttgaaactcgcaccggatgataaactc
atacggttcatcgaatcggattctcccggcaaggaggaccttgcatggatttccggattc
aaaggttcaaggacgttcaggaagatccttgaacagtatgtggaggaaatcgaagagaga
ttttatacctccaaggatttctatgtggataaatataagctgttcacagcaaagcgtttc
acccatctattcaaagaggagtatacgtatctgccggtctaccgaaggatcactaaactc
aagtcccttcttcagaatgttgtcaggtcgaacaaggccgagatgatcacaaaagtggag
gacttttttgacgcccgcattgaagcggctttatccagaaggagcgagaatcggaaggct
tatgtcacaaaagccctcgatacgaagcttgaacgcctagaagaactgaaaaaagccatc
aggacaagtgtgacaggctatatgaagcaattcgaacggaagcagctggatcactatttc
aaggaattattttcagatcccgggcgcctggtttcctattcaggtggtgagctctcacat
gaacgagccgacctggtatgttcctatacgttgaaactggccaataagaaacagtatgag
tcagaggatctggccatcctgttgttcctgcaaacccacctttacggcatcgataaatat
gtgaaagcgaagaacatcgtcatcgatgaagcccaggactatagctatctgcagctctat
gcattgaaaaaagccctgggaaccgatatgttcacccttgtaggggacctcgcacagggg
atccattcgtatagggggcttcaatcttgggaaccggtctaccgggaaatcttcccgcgt
gccacgtatacagaacttcagaaaagctatcgaaccacggtggagattatggaagaagcc
aataggctgctcacacttcttccttacgaattcccaaaggtgaatcccgtcgttcgccac
ggggaatcacccgtaaagaaggtggtcagctcaagtgaagagatcggtgatgaggtgggg
catcttgtcgcatcaggaaaatcggaaggattccagacgttcgcggtcatctgtaagagc
atgaaggactgcaaagcaattgctcgtatcctggaagaacggtcgggactgagggtaaaa
ctcttggaagaacaggaatcgattccgaaggaccgcgtggtcgtggtcccttcttacctt
tctaaggggcttgaattcgattcggtggttctcgttgccatggatgagcgctatgatcct
tccaatgaacttgatatcaagttgcagtacgtaggcatgacccgcccgcttcaccagctg
acctttatcagcacatcattcgacagtttcataggatga
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