Rossellomorea marisflavi: D5E69_08360
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Entry
D5E69_08360 CDS
T07410
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rmf
Rossellomorea marisflavi
Brite
KEGG Orthology (KO) [BR:
rmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmf03400
]
D5E69_08360 (addB)
Enzymes [BR:
rmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D5E69_08360 (addB)
DNA repair and recombination proteins [BR:
rmf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
D5E69_08360 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Sua5_C
Motif
Other DBs
NCBI-ProteinID:
QHA35827
LinkDB
All DBs
Position
1580125..1583601
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AA seq
1158 aa
AA seq
DB search
MTVRFILGRSGTGKTHRILREIKEELRERPQGTPILYIVPDQMSFISEYELVNTPGLNGM
IRAQVFSFTRLAWKILQETGGMTRYHLSDVGLNMMIRKIIEENKGELSIFRKSSEKPGFI
GHVETMLTEFKRYCIEPGDLAAFKENGMGKKVLRDKLADLELIYEEFQSALAGKYLDSED
YFQLLSDQIQHSDLLQDAVIYIDGFHSFTPQEYRIIQQLIQRTRKVTIALTADAGEVRLP
ENELSLFRMTSETYGIIREACIEAAIPVEEEVMETPIRYQSGPLAHLEQHYETRPVISSE
AEGNRIEFMEASNRRAEIEGVARKIRELARGRDHRYKDIAVLVRNGADYRDKIETIFQDH
DIPYFLDQKRTMLNHPLIELIRSTLEIISSNWRYEPVFRAVKTDLLFPLHEEPGELREKM
DRLENYVLAHGVKGDRWVKKDRWKYRRFRGLEHVDSPQTDQEKEIEHEINELRLFISAPI
IRLSKRLKKQKTGQEYCETLFAYLEELDIPAKLERKRVEAEENGDLVAAREHDQAWAAVM
DLLDQYVEILGGEKTSVKAFASILDTGMEAMKFSLVPPAIDQVIIADLEKSRLAHIKTAF
VIGVNEGVLPAKVTEDGILSDEDRETLQIGGVKVGPRSRTKLLDEEFVAYKAFTTPGERL
IISYPIADEEGKALLPSPLIKRLKELFPTAGHSLVVNDPAELDERGQLDYVSHPGVSIAH
LTTQLQQKKRGYPVFDFWWNVYDYYVTSDQWKWHAGHVLSSLFHRNESAVLTDEASKDLY
GEHILASVSRMEMFHGCPFSHFASHGLKLRERELFRLEAPDIGEMFHSALKWISEEVERA
GLSWASLSRNQCLRLAKEAVAMLAPKLQHQILLSSNRYHYIAQKLEQIIGRANLILSEHA
KASGFVPVGVELGFGPKATLPPFQFKLRNGTQMELQGRIDRVDKAEDQNGVYLRIVDYKS
SARDLDMTEVYYGLALQMLTYLDIVLSNSKQFVGKEAKPAGVLYFHVHNPLINSKKLLTL
DQIEQEIFKSFKMKGLVLGDSDVIRLMDQTLDTGNSDIISAGIKKDGSLSSRSKAASGED
FQYMRHHVRKMYESSGNRIVSGETGISPYKLKDRTPCQFCSYKPVCQFDQSLEENEYRVL
PEAKPEDIMAKIREEADQ
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgacggtaagattcattcttggacgctctggaacagggaagacgcatcgtatattgcga
gaaataaaagaggaactgagggaacgtccgcaagggaccccgatcctttatatcgtaccc
gaccagatgtccttcatatcggaatacgagcttgtgaacacaccggggctgaacggtatg
atccgtgcacaggtattcagttttacgcgtcttgcgtggaagatcctccaggagacgggg
ggcatgacccgctatcatttatcggacgtcggcctgaatatgatgatcaggaaaatcatc
gaagagaataaaggagaattgagcattttccggaagtcgtctgaaaaacccggtttcatc
gggcatgtggaaacgatgctcacagagttcaaacgctattgcatcgaaccgggcgacctt
gccgccttcaaggaaaacggcatggggaaaaaggtgctcagggataaacttgcggatctt
gagctgatttatgaagaatttcagtctgccctggcagggaaatacctcgattcggaagat
tattttcagttgctttccgatcagatccagcattccgatctcctgcaggatgcagtcatc
tacatagatggtttccatagtttcaccccacaggaatacaggatcatccagcagctcatc
cagcgcacccgcaaagtgaccatcgccctgacggcggatgccggggaagtgagactccct
gagaacgaactcagcctcttccggatgacaagtgaaacatatgggatcatccgggaagcc
tgtatcgaggccgctataccggtggaagaagaagtgatggagacgccgatccgctatcag
agcggacccctcgcccatctggagcagcactatgagacaaggccggtcatctcttccgaa
gcagaaggcaatcggattgaatttatggaagcatcgaatcgccgggcggagatagagggg
gttgcacggaaaatccgggagcttgcccgtggaagggatcaccggtataaggatatcgcc
gtcctggtcagaaacggggcggactacagggataaaatcgaaacgatcttccaagaccat
gatatcccgtacttccttgatcaaaaacggacgatgctcaatcatcccctgattgaactg
atccgctccactcttgaaatcatctcttccaattggaggtatgaacccgtattccgggct
gtgaagaccgatttactattcccccttcacgaggaaccgggggagctcagggagaaaatg
gatcgcctggaaaattacgtccttgcccatggggtgaagggagaccgatgggtgaagaag
gaccggtggaagtatcgtcgattcagggggcttgaacacgtggattctccccagaccgac
caggaaaaagaaattgagcatgaaatcaacgagcttcgactctttatctcagcaccaatc
atccggttgtcaaaacggttgaaaaagcagaagacggggcaggaatactgcgaaacgctc
ttcgcctatctcgaggaacttgatattcctgcgaagctcgagcggaagcgggtggaagcg
gaagagaacggggatctggtggctgcaagggagcatgaccaggcatgggccgctgtcatg
gacctcctcgatcaatacgtggagatcctgggtggggaaaagacgagcgtgaaggcattc
gcctcaattctcgatacgggcatggaagcgatgaagttttccctcgtaccgcctgccatc
gatcaggtcatcattgcagaccttgagaaatcaaggctcgcccatatcaaaactgcgttc
gtcatcggtgtgaacgaaggggtactccctgccaaagtgaccgaagacggtatcctgtcg
gatgaagacagggaaaccctgcaaatcggaggagtgaaagttggcccaaggagcaggacg
aagctcctggatgaagagtttgtagcctataaagcgttcacgacaccgggtgaacgattg
atcatttcctatccgatagccgatgaggaggggaaggctctcctgccatcccccctcatc
aagaggctcaaggaactgttcccgacagcaggacattcccttgtcgtcaatgatccagct
gagctagacgaacgtggtcagcttgactatgtcagccatcccggggtttccattgcccat
ttgacgacgcagcttcagcagaagaagcggggatacccggtctttgatttttggtggaat
gtatacgactactacgtcacatccgatcaatggaagtggcatgccggccatgtcctctcg
agcttgttccatcgcaatgaatcagccgtcttgaccgatgaggcgagcaaggacctgtac
ggggaacatatcctggccagcgtctcaaggatggaaatgttccacggctgtccattctcc
cattttgcaagtcacggcttgaaactgagggagcgggagttattcagactcgaagcacca
gacataggggagatgttccactctgccctcaaatggatttcggaagaagtggagcgtgcc
ggcctgagctgggcatccctctccagaaatcagtgtttaagactggccaaggaggcagtg
gcgatgcttgcgccgaagctgcagcaccagattctcctcagttccaaccgctaccactat
attgcacagaagcttgaacagatcatcgggcgggcgaatttgatcctcagcgaacatgcg
aaggccagtggtttcgtacccgtcggcgtcgaacttggctttgggccgaaagcgacgctt
cccccgttccaattcaaactgcgcaacggtacgcaaatggagcttcagggaaggatcgac
cgggtggacaaagcagaggaccagaatggcgtatacctccgcatcgtcgattacaaatcg
agcgcgagggacctggacatgaccgaggtgtactacgggcttgcccttcagatgctcacc
tacctggatatcgtattgagcaattccaagcaattcgtaggaaaagaagcgaaacctgcg
ggggtcctctatttccacgtgcacaatcccctgatcaacagcaaaaagctccttaccctt
gatcaaattgaacaggagattttcaaaagcttcaagatgaaaggactggtgctgggggac
agcgatgtgatccgcctgatggaccagacgttggataccgggaattcagacatcatttcc
gcggggatcaaaaaggacggctccctgtcatcgagatcgaaggcggcgtcgggagaagac
ttccagtacatgcgccatcatgtaaggaaaatgtatgaatcatcgggaaatcggatcgtc
tcaggtgaaacgggcatctcgccatataaactgaaggaccggacaccatgtcagttctgt
tcctacaaacccgtctgccagttcgatcagtcccttgaggaaaatgaatacagggtactg
cccgaggcaaagccggaagacatcatggcgaagataagagaggaggctgatcaatga
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