Rossellomorea marisflavi: D5E69_10080
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Entry
D5E69_10080 CDS
T07410
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rmf
Rossellomorea marisflavi
Brite
KEGG Orthology (KO) [BR:
rmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmf03032
]
D5E69_10080 (topA)
03400 DNA repair and recombination proteins [BR:
rmf03400
]
D5E69_10080 (topA)
Enzymes [BR:
rmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D5E69_10080 (topA)
DNA replication proteins [BR:
rmf03032
]
Prokaryotic type
DNA Topoisomerases
D5E69_10080 (topA)
DNA repair and recombination proteins [BR:
rmf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D5E69_10080 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
GH123_cat
Chordopox_A30L
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QHA36137
LinkDB
All DBs
Position
1924535..1926613
Genome browser
AA seq
692 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVRASMGHIRDLPKSQMGVDVEHEFEPKYITIRGK
GPVLKELKTAAKKVKKIYLAADPDREGEAIAWHLAHSLDIDVASDCRVVFNEITKDAIKE
SFKHPRAINMDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIDREN
EIKEFTPEEYWSIDAQFKKGKDSFSAAFYGIDGKKVELKNEDEVKEVLSQMKGKSFSVDK
VTKKERKRNPAPPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIEMGGKEGTVGFITYM
RTDSTRISEVAQKEAGEYIVGKYGEEFLKTSPRKEKKQQKAQDAHEAIRPTSTLRDPSSV
KEFLSRDQHRLYKLIWERFVSSEMAPAVMDTMSVDLVNGGVFFRATGSKVKFPGFMKVYV
EGSDDQKEEKDNILPALKEGDKVTSEAIDPNQHFTQPPPRYTEARLVKTLEELGIGRPST
YAPTLDTIQRRGYVSLDNKRFIPTELGEIVLELVREFFPDIIDVEFTANMEKSLDDIEEG
NEKWEKIIEHFYKDFEKHLEIAENEMEKVEIRDEPAGEDCEECGHPMVFKMGRYGKFMAC
SNFPDCRNTKPIVKEIGVKCPKCEKGNIIERKSKKKRIFYGCDQYPECDFLSWDKPIERK
CPKCSEMLVEKKLKKGNQIQCVNCDYKEEEQK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatctggtaatcgtagaatcgccagcaaaggcaaaaacaatcgagcgttac
ttaggaaaaaaatataaagtgcgtgcatccatggggcatatcagggatttaccgaagtcc
cagatgggtgtcgacgttgaacacgaattcgaaccgaaatatatcaccatccgcgggaaa
ggccccgtcttgaaagaattgaaaaccgctgcgaaaaaagtgaagaaaatctatctcgca
gctgaccccgatagggaaggggaagccatagcatggcacctcgcccatagtctggacatt
gatgtcgcatcggattgccgtgttgtattcaatgaaatcacgaaggatgccatcaaggag
tcattcaagcacccgagggccatcaatatggatcttgtcgatgcacagcaggcaagaagg
atcctcgaccgcctagtcggttacaatatcagcccgcttttatggaaaaaagtgaagaag
gggctgagcgctggacgggtccagtcggttgcagtccgattgatcatcgacagggaaaat
gaaatcaaagagttcacacctgaagaatattggtccatcgatgctcagttcaaaaaaggg
aaagacagcttttcggcagcattctacgggatcgatggcaaaaaagtggaactgaagaat
gaagatgaagtgaaagaagtcctttcacagatgaaaggaaagtcattctctgttgacaag
gtaaccaaaaaggaacggaagcgcaatccagcacctccattcaccacttcctcccttcag
caggaagcggcccgtaagctcaacttcagggcgaaaaagaccatgatgctcgcccagcag
ctctatgaaggaatcgagatgggcggcaaggaagggaccgtcggtttcatcacctatatg
agaaccgattcgaccaggatttccgaagtcgctcaaaaagaagccggtgagtacatcgtc
ggaaaatacggggaggagttcctcaaaaccagtccccgtaaggaaaagaaacaacagaaa
gcccaagacgcccatgaagccatccggcctaccagcaccctgagggatccgtcttcggtg
aaggaattcctgtcacgggatcagcaccggctctataagctgatctgggaacggttcgta
tctagtgaaatggcaccagccgtcatggatacgatgagtgtggacctggtcaatggagga
gtattcttccgggcgacgggctcaaaagtgaaattccctggattcatgaaggtctacgta
gaaggatcggatgaccagaaggaagagaaggacaatatccttcccgccctcaaagaaggg
gataaagtcacctccgaagccatcgacccgaatcagcatttcacccagccgcctccaaga
tacaccgaggccagactcgtcaagacccttgaagagttggggatcggtcgtccgtccaca
tatgcaccgacattggataccatccagagaaggggatatgtatcccttgataacaagcgg
tttatccctaccgaactcggggagatcgtcctcgagcttgtacgggaattcttccccgat
atcatcgacgtggaatttaccgccaatatggaaaaaagcctggatgatatcgaagagggc
aatgaaaaatgggaaaaaatcatcgagcatttctataaagatttcgagaagcatctggaa
atcgccgagaatgaaatggaaaaagtcgagatccgggatgagccggccggtgaagactgt
gaagaatgcggccatccgatggtattcaaaatgggacgctacggaaaattcatggcgtgc
agcaacttccctgactgtcgcaacacgaagccgatcgtcaaggaaatcggcgtgaaatgt
ccgaagtgcgaaaaagggaatatcattgagaggaagagcaagaagaagcgaatcttctac
ggatgtgatcaatatccggaatgcgacttcctttcctgggataagccgattgaacggaaa
tgtccgaaatgttccgaaatgctcgtggagaagaagctcaaaaaaggaaatcagatccaa
tgtgtcaactgcgattataaggaagaagaacaaaagtaa
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