Rossellomorea marisflavi: D5E69_10370
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Entry
D5E69_10370 CDS
T07410
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rmf
Rossellomorea marisflavi
Pathway
rmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D5E69_10370 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmf03019
]
D5E69_10370 (pnp)
03016 Transfer RNA biogenesis [BR:
rmf03016
]
D5E69_10370 (pnp)
Enzymes [BR:
rmf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
D5E69_10370 (pnp)
Messenger RNA biogenesis [BR:
rmf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D5E69_10370 (pnp)
Transfer RNA biogenesis [BR:
rmf03016
]
Prokaryotic type
tRNA degradation factors
D5E69_10370 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
SPATA25
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QHA36190
LinkDB
All DBs
Position
1979807..1981927
Genome browser
AA seq
706 aa
AA seq
DB search
MEQTKQTFSIDWAGRELTVEVGQLAKQANGAALIRYGDTAVLSSATASKEPKPLDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSERAILASRLIDRPIRPLFADGFRNEVQVISMVMSV
DQDCSSEMAAMFGSSLALSVSDIPFEGPIAGVVVGLIEGEFIINPTVEQLEKSEIHLSVA
GTKDAINMVEAGADEVPEETMLEAIMFGHEEIKKLIAFQEEIIAKVGKEKLEIKLFELDE
VIETEVRSLCESELIPAIQVQEKHAREEAIKEVKNKVISVYEEKEADDDTLKQVKKVLDK
LVKNEVRRLITEDKVRPDGRGVDEIRPLSSEVGLLPRTHGSGLFTRGQTQALSICTLGAL
GDVQVLDGLGIEESKRFMHHYNFPQFSVGETGPIRGPGRREIGHGALGERALDPIIPDES
DFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLIKSGDHYSILT
DIQGMEDHLGDMDFKVAGTSKGVTALQMDIKIDGLSREILEEALQQAKKGRMQILDSMLA
TISESRTSLSAYAPKILTMHINPDKIRDVIGPSGKQINKIIDETGVKIDIEQDGTIFISS
TDEESNKKAKKTIEDIVREVEPGQMYLGKVKRVEKFGAFVEIFAGKDGLVHISELAEERV
RKTEDVVAVGDQLLVKVLDIDNQGRVNLSRKAVLKEQREKEEQNQA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaacagactaaacaaacattttccattgattgggccggacgtgaattgaccgtcgaa
gtcggccagcttgccaagcaagccaatggtgctgcactgataagatatggagataccgct
gtactgagcagtgcaacagcttcaaaggaaccgaaaccgttagatttcttccctttgaca
gtcaactacgaagaaagactttatgccgtaggtaagatccctggaggtttcatcaaacgt
gaaggacgtccgagtgagcgggcaatccttgccagccgactgatcgacagaccgatccgt
ccactatttgccgacggtttccgtaatgaagtgcaagtcatttccatggtcatgagtgtc
gatcaagactgctcatccgaaatggctgctatgttcggatcttccctggcgctatctgtg
tcggatatcccattcgaaggaccgatcgcaggagttgtcgtcgggctgatcgaaggagag
ttcattatcaatccaactgtggagcagcttgagaagagtgaaatccacctttctgtagct
ggtacgaaggatgccatcaacatggttgaggcaggggcagacgaagttcctgaagagacg
atgcttgaagcgatcatgttcggacatgaagagatcaaaaagctgattgccttccaggaa
gaaatcatcgcaaaagtgggtaaagagaaacttgaaatcaaactgttcgaactggatgaa
gtcatcgaaacggaagtgcgctccctatgtgagagcgaattgatcccggccatccaggtc
caagaaaaacatgcacgcgaagaagcgatcaaagaagtgaaaaataaagtcatctctgtt
tatgaagaaaaagaagcagatgacgatacgctcaagcaggtcaaaaaggtgctggacaag
cttgtgaaaaatgaagtccgccgtttgatcacggaagataaagtccgtcctgatgggcgt
ggagtggatgaaatccgtcccctttcctctgaagtgggtctccttccgagaacgcatggt
tccggcttgttcacacgtggacaaacccaggccctcagcatctgtacactgggtgccctt
ggtgacgtccaggtccttgatggactgggcatcgaagaatccaagcgattcatgcaccac
tataacttccctcaattcagcgtgggagaaaccggaccgatccgtggccctggccgtcgt
gaaatcgggcacggagcccttggtgaaagagcccttgatccgatcatcccggatgaatcc
gacttcccatacacgatccgacttgtatccgaagttcttgagtccaacggatctacatcc
caggcgagtatctgtgcaagcaccctggcgatgatggatgcaggtgttccaatcaaggca
ccggttgcaggtattgcgatgggtctgatcaaatcgggcgatcattattccatcctgacc
gatatccaaggcatggaagatcatcttggagacatggacttcaaggtggcgggtacatcc
aaaggggtaacggccctgcagatggacatcaagatcgatggcctttcaagggaaattctt
gaagaagcactccaacaggcgaaaaaagggcgcatgcagattctggacagcatgcttgcg
acgatttcagaatcaaggacgtccctttccgcttatgctcccaagatccttacgatgcac
atcaatccggataaaatccgcgacgtcatcggaccaagcggtaaacagatcaataagatc
attgatgaaaccggcgtgaagatcgacatcgagcaggatgggaccatcttcatctcgtct
accgatgaagagagcaacaaaaaagcgaaaaagaccatcgaagatattgtcagggaagta
gagcctggccaaatgtatcttggaaaagtcaagcgcgtagagaagttcggtgcattcgtc
gaaatctttgcaggaaaagatgggcttgtccacatttccgagcttgctgaagagcgcgtc
cgtaaaaccgaagacgttgtcgctgtcggtgatcagctccttgtgaaggtgttggatatt
gataatcaaggtcgtgtcaacctatcaaggaaggccgtcctcaaggaacagcgtgaaaaa
gaagagcaaaaccaggcataa
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