Rossellomorea marisflavi: D5E69_13695
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Entry
D5E69_13695 CDS
T07410
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rmf
Rossellomorea marisflavi
Pathway
rmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D5E69_13695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmf03019
]
D5E69_13695
03400 DNA repair and recombination proteins [BR:
rmf03400
]
D5E69_13695
Enzymes [BR:
rmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D5E69_13695
Messenger RNA biogenesis [BR:
rmf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D5E69_13695
DNA repair and recombination proteins [BR:
rmf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D5E69_13695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QHA36767
LinkDB
All DBs
Position
complement(2628538..2630001)
Genome browser
AA seq
487 aa
AA seq
DB search
MNIHEELKKHFGYETFRAGQEETITSILDGRDTLSMLPTGTGKSLCYQLPGKLIEGQVLI
VSPLLSLMQDQVEQMKVNGEKSVIALNSFLTYQEKVWALDHIQRFKFIFVSPEMLKSEAF
RTAASRIRVTLFVVDEAHCISQWGPDFRPDYLDLGEARERLGMPVTLALTATATRTVRDD
IREVLRMEGAAELVHSVDRKNIGLFVRNVEDDRHKRDEVLSFVERLKGPGIIYFTSKRKA
EDVAHWLRDQGVKGVAHYHGGMDHEERILIQQQFLSDKLQIICATSAFGMGVNKENVRFV
LHYHLPASIESYLQEIGRAGRDGRESVSLVLYAEQDASIPLQFMHSELPDDAQIEGAIRA
VPAMEWSEIIAALQLSDVQYRFLAYYIQSYARYRSDRMIEEIKRIRDARLAYKRRNLDSI
MGWLHTMACRRQVLLEHFGEELQDRPERCCDRCGSDLAEFHGEEAHSSPSNDHWADQLKK
ILLGSVV
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgaacatacatgaagaactgaagaagcactttggatacgaaacgttccgtgcaggacag
gaagaaaccatcacatccattcttgacggccgtgatacgttgtccatgcttcctacagga
accggtaaatccctctgctatcagctccctggtaagctaatagaaggtcaggtgcttatt
gtatcccccttgctttccctcatgcaggatcaggtcgaacagatgaaggtgaacggggaa
aaaagtgtgattgccctcaattcctttctcacttatcaggagaaagtatgggcgctggat
cacatccaacgattcaagttcatattcgtttctccagagatgttgaaaagtgaggcattc
cgaaccgccgcttccaggatcagagtaacgttgttcgtggtcgatgaagcacactgcatt
tcccagtggggacccgatttccggccggactacttggacctgggcgaggcgagggagcga
ctggggatgccggtcacccttgccctcactgccactgctacaaggactgtacgggatgac
atccgggaggtgctccgtatggagggggcagccgagcttgtccattctgtcgatcggaag
aacatcggattatttgtaagaaatgtggaagatgaccgtcataaacgggatgaagtgctt
tcgttcgtagagcgtctcaagggacctggaatcatttatttcaccagtaaacgaaaagcg
gaagatgtcgcccattggctccgcgatcagggagtgaagggggtcgcacactatcatggg
ggaatggaccatgaagagcggatcctgatccaacagcaattcctatcggataaactgcaa
atcatctgtgctacgtcggccttcggcatgggcgtgaacaaggaaaatgtacgctttgtc
ctccattatcatctgccggcaagcattgaatcctaccttcaggagatcggccgtgctgga
agggatggaagggaaagcgtctctcttgtcctgtatgcagaacaggatgcgtccatcccc
cttcaattcatgcatagcgagctgccggatgacgcacaaatcgaaggtgcgatcagggca
gtgcccgccatggaatggtctgagatcatcgcggccctgcagctgtctgatgtgcagtac
aggttccttgcatactatatccagtcgtatgcccgctatcgttctgatagaatgatagaa
gaaatcaaacggatcagggatgccagacttgcatataaacgcaggaatctggattcaatc
atgggatggctccacacgatggcatgcaggcgtcaagtgctactcgagcacttcggtgag
gaacttcaggatcggccggaacgatgctgtgaccgatgcggatcagatcttgctgagttt
catggcgaggaagcccattcttccccgtccaatgaccattgggcggaccagctcaaaaaa
atactgttaggatcagtggtataa
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