Rossellomorea marisflavi: D5E69_14985
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Entry
D5E69_14985 CDS
T07410
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
rmf
Rossellomorea marisflavi
Brite
KEGG Orthology (KO) [BR:
rmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmf03019
]
D5E69_14985
03009 Ribosome biogenesis [BR:
rmf03009
]
D5E69_14985
Enzymes [BR:
rmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D5E69_14985
Messenger RNA biogenesis [BR:
rmf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D5E69_14985
Ribosome biogenesis [BR:
rmf03009
]
Prokaryotic type
rRNA helicases
D5E69_14985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_22
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QHA36989
LinkDB
All DBs
Position
complement(2869535..2870842)
Genome browser
AA seq
435 aa
AA seq
DB search
MTKNAFTQYEFKTFIQHAIEERGFHEPTEIQKKMIPMILKGQSAIGQSQTGTGKTHSYLL
PIIEKIHAASETVQAVITAPTRELAQQIYQEILKITKDTDITSRCFIGGTDKQRTIEKLK
SQPHIVVGTPGRINDLVKEQALLVYTATMLVIDEADLMLDMGFIEDVDQIAGKMPENLQM
LVFSATIPEKLKPFLKKYMENPQFAHVEPERLSAKNIEHVIVPVKSRDKINLLYNILTDI
NPYLGIVFTNTKSKADEVADALIAKGLKVGRIHGDLSPRERKKVMKQTRNLEFQYIVATD
LAARGIDIEGISHIINFELPQDLDFYIHRTGRTARAGNSGIAFTIYEASDEDAINRLEKK
GIHFAHKDLKKGDWVELPALNKRKNRQKTSADEADVKAKSMVRKPKKVKPGYKKKMKYKM
EQIKKRERRIKSRNK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgactaagaacgcctttacacagtatgaattcaaaacgttcattcagcatgctattgaa
gaacggggttttcatgagccgacagaaatccagaaaaagatgatcccgatgatcttgaaa
ggccaaagtgccatcgggcaatcccagaccggtacaggcaagacccattcctatctgctc
ccgatcattgagaagatccatgcagcttccgagacggtccaggcggtaatcactgcgcct
acgagggaacttgcccagcaaatctatcaggagattcttaagatcaccaaagacactgat
atcacatctcgctgtttcatcggcggaacggacaagcagcggacaatcgaaaaactgaag
agccagccgcatatcgtcgtaggtacgcctggacggatcaatgatcttgtcaaagaacag
gctttgctggtttacacagcgaccatgcttgtaatcgatgaagccgacttgatgcttgat
atgggattcatcgaagatgtggatcaaatcgcaggcaaaatgccggaaaaccttcagatg
ctcgtattctctgcgaccatcccagagaagttgaagcctttcttgaagaagtatatggag
aatcctcagttcgcccatgtggagcctgagcgtctatctgcgaagaacatcgagcacgtc
atcgtcccggtgaaaagccgtgacaaaatcaacctgctttacaacatcctgaccgatatc
aacccgtacctcgggatcgtgttcacaaacacgaaatcgaaagcggatgaagtggcggat
gccctgattgccaaaggcttgaaagtagggaggatccacggtgacctctctccgcgtgaa
cggaaaaaggtaatgaagcagacaaggaatctcgaattccaatacatcgtggcgacagac
cttgctgccagggggatcgacatcgagggaatcagccatatcatcaactttgaattgccg
caggaccttgatttctacatccacaggacaggccgtacggctcgtgccggcaacagcggg
attgccttcaccatctatgaggcgtccgatgaagatgccatcaaccgactggagaaaaag
ggtatccactttgcccacaaagacctaaaaaaaggcgactgggtcgagctccctgcgctg
aataaacggaagaaccgccagaaaaccagtgcggatgaggcagacgtaaaagccaaatcc
atggtacggaagccgaaaaaggtgaaaccgggatacaaaaagaaaatgaaatacaaaatg
gagcagatcaaaaagcgtgaaagaaggatcaaaagcaggaacaaataa
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