Rossellomorea marisflavi: D5E69_16715
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Entry
D5E69_16715 CDS
T07410
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rmf
Rossellomorea marisflavi
Brite
KEGG Orthology (KO) [BR:
rmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rmf03016
]
D5E69_16715 (thpR)
Enzymes [BR:
rmf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
D5E69_16715 (thpR)
Transfer RNA biogenesis [BR:
rmf03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
D5E69_16715 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
Motif
Other DBs
NCBI-ProteinID:
QHA37290
LinkDB
All DBs
Position
complement(3219675..3220259)
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AA seq
194 aa
AA seq
DB search
MRQPHYFFALPLPEEEKLRLADQAEAFPFKKPVHHQDFHLTLAFLGGSGEDALDLVKSKV
RQVARLHEPFTLTFSDFDVFGRREAPRIFWMGVAPSDELTRLRAAVYGACLEAGYELDPR
PFAPHITVARKWGGEYAFDERSPEIEPLHTEFPVEQVVLYRTRLEHIPKYEPVATFPLKG
LTPGERGEPHGTAH
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagcctcattatttctttgccctcccccttccggaagaagaaaagctccgtttg
gcggatcaggcagaagcatttccattcaaaaagccggtccatcatcaggacttccattta
acactggcattccttgggggttccggggaggatgccctggacctggtgaagtccaaggtg
aggcaagtggcaaggttgcatgaacctttcacattgaccttcagtgactttgacgttttc
gggcgcagggaagcaccgcgcatcttctggatgggggtggccccttccgatgagctcacc
cgtctgagggcggccgtttatggggcatgcctggaggcgggatacgagttggatccccga
ccgtttgctccccacatcaccgtggcgcgtaaatgggggggagagtatgcattcgatgag
cgttctccagaaatcgaaccacttcataccgaatttcccgtagaacaagttgtcctgtac
cggacacgactggaacatatcccaaaatacgagccggtggcgacgttcccattgaaaggg
ctgacaccgggagaaagaggagaacctcatggcacagctcattaa
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