Rossellomorea marisflavi: D5E69_18635
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Entry
D5E69_18635 CDS
T07410
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
rmf
Rossellomorea marisflavi
Pathway
rmf02020
Two-component system
rmf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rmf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D5E69_18635 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D5E69_18635 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmf03021
]
D5E69_18635 (rpoN)
Transcription machinery [BR:
rmf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D5E69_18635 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_23
HTH_38
Sigma70_r4
HTH_31
rve
HTH_IclR
HTH_21
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QHA37607
LinkDB
All DBs
Position
complement(3578386..3579663)
Genome browser
AA seq
425 aa
AA seq
DB search
MNLSAGLFQQQQQKLQMTQQLSQAITILQYSTMELNDFLESKAMENPLIQLKPPKRKLAE
WQDFVSDTTKSLSEALLIQLNLKSLTSVERDCLEELIFSLDDNGYLHIEPGYFLKKYEIG
EEELESTISMIQSLEPAGIGARSLQECIHLQLDRRWEVPDFVLTIVSDHFQAFADRKWRE
IAKAMGIELKEVQAAADFVTQCNPRPGAVFAKDFSHYIVPELNVRVWGDDVTVALYDGTS
ITVTFNKEYTDFLGHHPDRDVASYIKEKNQEFEWLVLSLRQRKQTMLKVGKAIVEKQRGF
FLHGPGHLQPLTLRQIAEEVGAHESTISRAVRGKYVQTPYGVFELKSFFTAAVRAVDTAE
ETVSAGTVKRELQELVNQEDKRKPLSDQKLVALLTEKGCDVSRRTVAKYRDQLGIPSSSK
RKRYE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgagtgcaggactttttcagcagcaacaacaaaagctccagatgacccagcag
ctttcacaggcaatcacgatccttcagtactccacgatggagctgaatgacttcctggaa
tcgaaagcgatggagaaccccctgatccaattgaaaccgcccaagcggaagcttgcagag
tggcaggactttgtatcggatacaacgaaaagcctgtcggaagctctattgatacaactg
aatttgaaatcgcttacgagcgttgaacgtgattgtttggaagaattgatcttcagcctt
gatgacaatgggtatctccatattgaacccgggtattttttgaaaaaatatgaaatcggg
gaagaagagcttgaaagcaccatcagtatgatccaatcgttggagcctgccggcattggg
gcccgctcccttcaggagtgcatccatttacagttggaccgtcggtgggaggtgcctgat
ttcgtcctcaccatcgtgagcgatcatttccaggcctttgcggaccggaagtggagggaa
atcgcaaaagccatgggcatcgagctgaaggaagtgcaggcggcggccgatttcgtcacg
cagtgcaatccacggccgggtgcggtctttgcgaaggatttctctcattatattgttcct
gaactcaatgtaagagtctggggagacgacgtgacggtcgccctgtacgatgggacttca
atcacggtcacttttaataaggaatatacggattttctcggtcatcatcccgaccgcgat
gtagcatcttatataaaagaaaagaaccaggaatttgaatggctcgtcctgagcctgcgt
cagcggaagcagacgatgctgaaggtgggaaaggcgatcgtggagaagcagaggggattc
ttcctccatgggccgggccatctccagcctttgacgctgaggcagatcgctgaggaggtc
ggagcccatgaatcgaccatcagcagggccgtcagggggaagtatgtgcagacgccttat
ggggtgtttgaactgaagagcttttttacggctgctgttcgtgccgtggacacagctgaa
gaaacggtgtctgccggtacagtgaagagggagctgcaggaacttgtcaaccaagaggac
aagcgaaagcccctttctgaccagaagcttgtggccctgctgacagaaaagggctgtgac
gtctcgaggcggacggtggcgaagtaccgcgaccagctcggcatcccgtcttcttcgaag
cgcaaacgatatgagtaa
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