Rhodothermus marinus SG0.5JP17-172: Rhom172_0061
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Entry
Rhom172_0061 CDS
T01606
Name
(GenBank) alpha amylase catalytic region
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Pathway
rmg00500
Starch and sucrose metabolism
rmg01100
Metabolic pathways
rmg01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Rhom172_0061
Enzymes [BR:
rmg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
Rhom172_0061
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GFIT
Motif
Pfam:
Alpha-amylase
FlgD_ig
Por_Secre_tail
Glyco_hydro_70
Motif
Other DBs
NCBI-ProteinID:
AEN72012
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Position
59851..62538
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AA seq
895 aa
AA seq
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MYRYLLMLLLAGLTLQAQAQHDVMMQAFYWDVPVDAAAKNGFWWDTLAAKAPELAAAGIT
AIWVPPPSKGNFGIYDMGYGIYDHFDLGNYNQKGTVETRFGSRDELLKMVQTMHAYGIEV
YADIVLNHIFGGPDNLEPNPAVKQYVFDEAIRDPDGDGHYDQFSPYPTNEIIWRIPDAEP
GDYYIKIKGYWLPCSDPKGERGYDLYINWDGSPDQPNSPDNANWEYEPNDGNGQYNDFPG
SGKHIWAHIDPCGDVDEYKITLTETHTIEIRLEARREVYNPFDFVPTDQRRGYYPFEIWH
NGQNLAPTALQAWTYTGITYVTHTGPGEANWSWNYSHFHPVDDRDYLGWPGTDEVIPNTK
FFGNDLNTFDPVVQDRLITWGQWLTNTVGFDGYRLDFVRGYQPEFAAAWINNMPRRSDGS
QRFVVAEYWGGKAAIKNWVTTVESLGADADAFDFPLKATLTDMANWNGADWDMSWLNHAG
LVRDNGGNNLSGLQVVTFVENHDTGKEHDKWLWRDWDMAYAYILFAEGRPTIFYPHFYGI
PQHDHSDPGITVQAPASLRQDIIRLINLRRNYLGGTMVVLSEVGNPWPSAEVADVFVARR
GGNGTRSGAILVLNDHETDTKGLWVDSSPTGWPNWAGKDLINPETGETTHIYDDGRVYVW
APPRDYAIWVLQEEYDAGLLAADTGEPCTLAQIASQTVSGNQGVATFYSPDGIRELQFTL
LDNLTVVSVQGAGGERFSPVEGGRYTLDDGQEPPVYVEVVFQQVDPAVSHGTYYAVVGSM
CPYEEDGLLEANLDPSLRFENRPQHFRWEGPAPNPFVGQTYFELALPEAAQVRLTVYDLL
GRAVQQLTSGAFAAGHHRIAWNADGLAGGTYLVRMEARTADGQHYVQDRVVTLRR
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgataccttctgatgctactgctggccggtctgacgctccaggcgcaggcccag
cacgacgtcatgatgcaggccttctactgggacgtgccggtggatgccgctgcaaaaaac
ggcttctggtgggatacgctggccgcgaaagctccggaactggccgcagccggcatcacg
gccatctgggtgcccccgccttccaagggcaattttggcatctacgacatgggatatggc
atctacgaccacttcgacctgggcaactacaaccagaaaggcacggtcgagacccgcttc
ggcagtcgggatgagctgctgaaaatggtccagaccatgcacgcctatggcattgaggtt
tatgccgacatcgtgctcaatcacatctttggcggtcctgacaatctggagcccaacccg
gctgtcaagcaatacgtcttcgacgaagccattcgcgacccggacggtgacggccactac
gaccagttcagcccctacccgaccaacgagatcatctggcgcattccagatgccgagccc
ggcgactactacatcaaaatcaaaggctactggcttccctgcagcgatcccaagggtgaa
cggggttacgatctttacatcaactgggatggctcgcccgaccagcccaactcgcccgac
aacgccaactgggagtatgagcccaacgacggcaacggccagtacaacgactttccgggc
tccggaaagcacatctgggcgcacattgacccctgcggcgatgtcgacgaatacaagatc
accctgacggaaacccacaccatcgaaatacgccttgaggcccggcgcgaagtgtacaat
cctttcgacttcgtgcccaccgatcagcgacggggttactatcccttcgaaatctggcac
aacggccagaacctggccccgacggcgctgcaggcctggacctatacgggcatcacgtac
gtgacccacaccggacccggagaggccaactggagctggaattacagtcacttccacccg
gtggacgatcgggactatctgggatggccgggcaccgacgaggtcatccccaacaccaaa
ttcttcggtaatgatctgaacaccttcgacccggtcgtgcaggaccggctcattacctgg
ggtcagtggctcaccaatacggtcggattcgatggctatcgcctggactttgtgcgcggc
tatcagccggagttcgccgctgcctggatcaacaacatgccccggcgtagcgacggcagc
cagcgctttgtggtggccgagtactggggcggcaaggccgccatcaagaactgggtgacc
acggtcgaaagcctgggcgccgatgccgatgcgttcgactttccgctgaaggccactctg
accgacatggccaactggaacggggccgactgggacatgagctggctgaaccacgccggg
ctggtgcgcgacaacggcggcaataatctctcgggcctgcaggtggtcacctttgtggaa
aaccacgatacgggaaaggagcacgacaaatggctctggcgcgactgggatatggcctat
gcctatattctgtttgccgaagggcgtcccaccattttctatccacacttctacggcatt
ccgcagcatgaccacagtgatcccggcatcacagtacaggcgcctgcctcgctgcgccag
gacattatccggctgattaacctgcgccgcaactatctgggcggtaccatggtggtgctc
agcgaggtgggcaatccctggccgagcgccgaggtggccgacgtgttcgtggcccgacgc
ggcggtaacggtactcgctcaggggccattctggtgctgaacgatcatgagacggacacc
aaagggctctgggtggatagttcgccgaccggctggccgaactgggccggaaaagacctg
atcaacccggaaaccggcgagaccacccacatctatgatgatggccgtgtgtatgtctgg
gcaccaccgcgtgactacgccatctgggtgctacaggaggaatacgatgctggactgctg
gccgctgatactggtgagccctgtacactggcacagatcgcctcgcagaccgtctccggc
aaccagggcgtggccacgttctattcccccgatggcatccgggaacttcagtttactctg
cttgacaacctgacggtagtttctgtgcagggcgctggtggcgagcgtttctcaccggtt
gaaggcggcaggtacacgctggacgatggccaggagccgccggtttatgtcgaggtggtg
tttcagcaggttgatccggcggtttcccacggtacctactatgccgtggtgggatcgatg
tgcccctacgaggaggacgggttgctggaagccaatctggatccctccctgcgcttcgaa
aatcggccacagcatttccgatgggaaggaccggctcccaatccctttgtcgggcagaca
tactttgagctggcgcttcccgaagcggcacaggtgcgtctgacggtatatgatctgctg
ggacgcgccgtccagcaacttaccagtggggcgtttgcggctggccatcatcgaatcgca
tggaacgccgacggactggccgggggcacctacctggtgcggatggaggctcggaccgcc
gatggccagcactacgtacaggatcgcgtggtcacgctgcggcggtag
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