Rhodothermus marinus SG0.5JP17-172: Rhom172_0416
Help
Entry
Rhom172_0416 CDS
T01606
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rmg03016
]
Rhom172_0416
Enzymes [BR:
rmg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Rhom172_0416
Transfer RNA biogenesis [BR:
rmg03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Rhom172_0416
Prokaryotic type
Rhom172_0416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AEN72360
LinkDB
All DBs
Position
460426..461406
Genome browser
AA seq
326 aa
AA seq
DB search
MELFVIPLGTASAVPTRTRHLSSVALWRAGRLLLFDCGEGTQYRLLAAELKAPRLEAIFI
THFHGDHFFGLFGLLATLAMLNRTEPLVIVGPEGIGRLIESMPGLSEAERGFPIRYVELA
EGFEHAVVFETADYVVTARPVEHRVFTVGYRFEERTRPGRLHVERARALGVTEPEQYRAL
KEGRPVQVGDRWVRPEEVLGPPIPGRTFAYLTDTRPCENGRLLAEGVDLLYHEATFGEVH
HALAVERGHATAREAAELAREAGAQRLLLGHFSARYEDPAPLVAEARAVFPNTEAAEELK
RYVLPPHAPRRAALQATANIADDRER
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtggagctgtttgtcattccgctggggaccgcttcggccgttcctacccgcacgcggcat
ctgtcgtcggtggcgctctggcgggccggccggctgctgctgttcgactgcggcgagggc
acccagtatcggctgctggcggccgaactcaaggccccgcgcctggaggccatcttcatc
acgcatttccacggagaccacttcttcgggctgttcggcctgctggccacgctggcgatg
ctgaaccgcaccgagccgctggtaattgtggggccggaggggatcgggcgcctgatcgag
tcgatgcccgggctgtcggaggcggagcggggcttcccgattcgctatgtggagctggcg
gagggattcgagcacgcggtggtgttcgagacggccgactacgtagtgacggcgcggccg
gtggagcaccgggtgttcacggtggggtatcggttcgaggagcgcacgcggccggggcgt
ctgcatgtagagcgggcgcgggcgcttggagtgaccgaacccgaacagtaccgggcgctc
aaggaagggcggccggtgcaggtgggcgaccggtgggtgcgccccgaggaggtgctcggg
ccgcccattccgggacgtaccttcgcctacctgaccgacacgcgcccctgcgagaacggt
cgcctgctggccgaaggggtggacctgctctaccacgaggcgaccttcggcgaggtgcac
catgcgctggccgtcgaacgcggccacgccaccgcccgcgaagccgccgaactggcccgg
gaagccggggcgcaacggctgctgctcggccacttcagtgcccgctacgaagacccggcg
ccgctggtggccgaggcccgcgccgtctttccgaacaccgaggcggccgaggaattgaag
cgctacgtgctgccgccgcacgcgccgcggcgagcggccctgcaggcaacggccaacata
gcagacgaccgtgagcgataa
DBGET
integrated database retrieval system
