Rhodothermus marinus SG0.5JP17-172: Rhom172_0527
Help
Entry
Rhom172_0527 CDS
T01606
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Pathway
rmg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rhom172_0527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmg03021
]
Rhom172_0527
03019 Messenger RNA biogenesis [BR:
rmg03019
]
Rhom172_0527
Transcription machinery [BR:
rmg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Rhom172_0527
Messenger RNA biogenesis [BR:
rmg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Rhom172_0527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
S1CSD-TOTE-2
NACHT
AAA_25
Spore_III_AA
ATPase_2
AAA_22
Mor
Motif
Other DBs
NCBI-ProteinID:
AEN72471
LinkDB
All DBs
Position
599355..600467
Genome browser
AA seq
370 aa
AA seq
DB search
MSEQTFRGMLELIGDKKFGFVREFRPDLPKGKNDPFVPPPVIRRYNLRDGVLIEGTLRPG
RKGDMQVDEIHSIMGVSPEEWAKTEDFESGQIVYPDEKFNLVTGPTDYAMRVVDLAAPIG
KGQRALIVAPPRAGKTVLLKQIAAGIAKNHPEVKLVALLVDERPEEVTDFRRSTPAIVFA
SSNDREEDNHIRVSTLALEFAKRLVELKHDVVLLLDSLTRLGRTFNLYVESSGRTLSGGL
DARALQIPRRIFGAARNIEGGGSLTIIATALIETGSRMDEVIFEEFKGTGNAEIVLDREM
ADKRIFPAINLRKSGTRNEERLIGDRIEQYHRLFRALNSRPPIEAMQALLRHMQQTQSNE
ELLNSLVPVE
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacagacgtttcgtggcatgctggagctgatcggggacaaaaagtttggcttt
gtgcgagaattccgccccgatctccccaagggcaagaacgatccgttcgtgccgccgccg
gtcatccggcgctacaacctgcgcgacggtgtgctaatcgagggcacgctgcgcccgggt
cgcaagggcgacatgcaggtggatgagatccactcgatcatgggcgtttcgcccgaggaa
tgggccaagaccgaggatttcgaatccgggcagatcgtctatccggacgagaaattcaac
ctggtcaccggcccgaccgactacgccatgcgcgtggtcgatctggccgcgccgatcggc
aagggccagcgcgcgctgatcgtggcgccgccgcgcgccggcaagacggtactgctcaag
cagatcgcggcgggcatcgccaagaaccatccggaggtcaaactggtggcgctcctggtg
gacgagcggcccgaagaggtgaccgactttcgccgctcgacgcccgccatcgtctttgcc
tcgtcgaacgatcgggaagaggacaaccacattcgtgtttcgacgctggcactggagttc
gccaagcgacttgtcgagctgaagcacgacgtggtgctgctgctcgattcgctcacgcgc
ctgggtcgcaccttcaacctctacgtcgaaagcagcggccgcacgctttcgggcggactc
gacgcgcgggcgcttcagattccgcggcgcatcttcggtgccgcccgtaacatcgaaggc
ggcggctcgctgacgatcatcgccacggcgctcatcgaaacgggcagccgcatggacgag
gtgatcttcgaggagttcaagggcaccggcaacgccgagatcgtgctcgaccgtgagatg
gccgacaagcgcatcttcccggccatcaacctgcgcaagagcggcacgcgcaacgaggag
cggctcatcggcgaccggatcgaacaataccatcggctgttccgggcgctcaactcgcgg
ccgcccattgaggccatgcaggctctgctgcgtcacatgcagcagacgcagtccaacgaa
gagctgctcaacagcctggtgccggtggagtga
DBGET
integrated database retrieval system
