Rhodothermus marinus SG0.5JP17-172: Rhom172_0613
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Entry
Rhom172_0613 CDS
T01606
Name
(GenBank) phenylalanyl-tRNA synthetase, beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Pathway
rmg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Rhom172_0613
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rmg01007
]
Rhom172_0613
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rmg03016
]
Rhom172_0613
Enzymes [BR:
rmg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Rhom172_0613
Amino acid related enzymes [BR:
rmg01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Rhom172_0613
Transfer RNA biogenesis [BR:
rmg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Rhom172_0613
Prokaryotic type
Rhom172_0613
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
AEN72552
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All DBs
Position
complement(693725..696202)
Genome browser
AA seq
825 aa
AA seq
DB search
MKLSYRWLQQYIDLDLSPSELAEALIGLGLEVEEVEPLGTDLKGVVIGRVLEVRPHPNAD
RLTLCRVDLGSGEPVPIVCGAPNVAAGQKVAVATPGTTLLLTDREGNRQPVTIRKTKIRG
EVSEGMICAEDELGLSDDHSGILVLPGDAPVGHPFVEYLQQQGLTVPDYRLEVSLTPNRA
DAASHIGMARDLSALLDRPLRRPEVAVPEPGGEAARQVQVTIDAPEACPRYVALLVRNVR
IGPSPLWLRQRLAAIGLRSINNVVDVTNYVLHECGQPLHAFDFDQLIGGRIHVRLARAGE
QFTTLDGKTRQLPEGALLICDAERPVALAGIMGGENSEVTDTTTNILIESAYFDPSTIRR
TSKALGLQTDSSYRFERGVDAGLQRWAAARAAQLIVEVAGGEIVPGVVDVQVRSFEPRTV
TLRLPRLAHVLGTEIPSGEVRRILDRLGFAPKPEGEAFRCTVPLYRPDVHEEIDLIEEVA
RVHGYDRLPMPEAFTVPARVPDEPPAQALRRRVRTLLAGFGLREIYTNSLLPREVVRRFV
PASGSDHQTDAPHLVETLNPISAEMAVLRPSLLPGLVQTIVYNQNRGQQVLRFFEFGRVF
ARTDRPDTPVPGFAEHEALVIGLSGPHAPEGWDVQPRLTDFFDLKGLIETLLDTLHLSDR
MALVPAESPEPTVAYQMNLVADGRVLGTLARLSDALQEAYELRAPLYYAELNWDAFAEIA
HPAQQRRYRPFSRFPEVDRDLAVLVDRDQPVGPLLETIREAGGELLRHVGVFDLYEGERI
PSGKKSVAFSLRFGADRTLTDEEVDARLEAIVRELERRFGAQLRR
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctcctaccgctggctgcagcaatacatcgacctggacctgtccccttcggag
ctggctgaggccctgatcggcctgggtctggaagtcgaagaagtcgagccgctgggcacc
gaccttaagggcgtggtgatcggccgcgtgctggaggtgcgcccccaccccaacgccgac
cgcctgacgctctgccgcgtcgatctgggaagcggcgagccggtcccgatcgtctgcggg
gcgcccaacgtggcggccggccagaaggtggccgtcgccacccccggcaccacgctgctg
ctgaccgaccgcgagggtaaccgccagcccgttacgatccgcaagacgaagatccggggc
gaagtgtccgagggcatgatctgcgccgaggacgaactcgggctctcggacgaccacagc
ggcatcctggtgctgcccggcgacgctcccgtcggccaccccttcgtcgaatacctgcag
cagcagggcctgacggtgccggactaccggctcgaagtcagcctgacgcccaaccgggcc
gacgcggccagccatatcggcatggcccgagatctctcggcgctgctcgaccggccgctg
cgtcgtcccgaagtggccgtacccgaacccggcggcgaggctgcccgccaggtgcaggtg
accatcgacgcgccggaagcctgtccgcgctacgtggcgctgctggtgcgcaacgtgcgc
atcggtccctcgccgctctggctgcgccagcgcctggccgccatcggcctgcgctcgatc
aacaacgtggtggacgtgaccaactatgtgctgcacgagtgcggccagccgctgcacgcc
ttcgacttcgaccagctgatcggcggacgcatccacgtgcggctggcccgcgcgggcgag
cagttcaccacgctcgacggcaaaacccgccagcttccggaaggcgccctgctgatctgc
gacgccgagcgaccggtggcgctggccggcatcatgggcggcgagaactccgaagtcacc
gacaccacgacgaacattctcatcgaaagcgcctacttcgatccgtccaccatccgacgc
acctcgaaggcactgggtctgcagacggactcgtcctatcgcttcgagcgcggggtcgac
gccggcctgcagcgctgggcggccgcccgcgcggctcagctcatcgtggaggtggccggt
ggcgagatcgtgcccggtgtcgtggacgtgcaggtgcggtcgttcgagccacgcaccgtg
acgctacgcctgccgcgcctggcccacgtactgggcaccgagattccgtccggcgaggtg
cggcgcattctggatcgtctgggctttgcgccgaagccggaaggtgaggccttccgctgc
acggtgccgctctaccgtccggacgtgcacgaggaaatcgatctgatcgaagaagtcgcc
cgcgtgcacggctacgaccggctccccatgcccgaagcgttcaccgtgccagcgcgcgtg
cccgacgagccgccggcccaggcgctgcgtcgccgcgtgcgcaccctgctggccggcttc
ggcctgcgggaaatctacacgaacagcctgctaccacgcgaggtggtgcgccgcttcgtg
cccgcctcgggttccgaccaccagaccgacgcgccgcatctggtcgaaacgctcaacccc
atctcagccgagatggccgtgctgcgaccgtcgctcctgcccggtctggtgcagaccatc
gtctacaaccagaaccggggccagcaggtgctgcgcttcttcgagttcggtcgcgtcttt
gcccgtacggaccgccccgacacgcccgtgcccggctttgccgagcacgaagcgctcgtc
atcggactgagcggcccgcacgctcccgaaggctgggacgtgcagccgcgcctgacggac
ttcttcgatctcaaggggctgatcgaaacgctgctggacacgctgcacctgagcgatcgc
atggcgctggttccggccgaatcgcccgagccgacggtcgcctatcagatgaacctggtg
gccgacgggcgcgtgctgggcacgctggcccgcctgtcggacgcgctccaggaggcctac
gaattgcgcgccccgctctactacgccgagctgaactgggatgcctttgccgagatcgcc
cacccggctcagcagcgccgctaccggcccttcagccgcttccccgaagtggaccgtgac
ctggccgtactcgtcgatcgcgaccagccggtcggtcccctgctcgaaaccatccgggag
gccggcggcgaactgctccgccacgtgggcgtcttcgacctgtacgaaggcgaacgcatc
ccgtccggcaaaaagagcgtggccttctcgctgcgcttcggcgccgatcggacgctgacc
gacgaagaggtggatgcccgcctcgaagcgatcgtccgagaactcgagcgccgcttcggt
gcacaactgcgccgttga
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