Rhodothermus marinus SG0.5JP17-172: Rhom172_0621
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Entry
Rhom172_0621 CDS
T01606
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Pathway
rmg03030
DNA replication
rmg03430
Mismatch repair
rmg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rhom172_0621
03430 Mismatch repair
Rhom172_0621
03440 Homologous recombination
Rhom172_0621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmg03032
]
Rhom172_0621
03400 DNA repair and recombination proteins [BR:
rmg03400
]
Rhom172_0621
Enzymes [BR:
rmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rhom172_0621
DNA replication proteins [BR:
rmg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rhom172_0621
DNA repair and recombination proteins [BR:
rmg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rhom172_0621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
DNApol3-delta_C
DUF6395
AAA_11
Docking
Tcf25
NblA
Motif
Other DBs
NCBI-ProteinID:
AEN72559
LinkDB
All DBs
Position
704723..705898
Genome browser
AA seq
391 aa
AA seq
DB search
MAWERIIGQERVVEALRRALAQQRVAHAYLFYGPDGTGKRAAALTFAQALQCERGGSDPC
GQCVPCTKVRRLIHPDVQVMLPHPSDADPDDLYERLQRLAAEPYATVDYIRRPVLDDPTR
ASNKQAFYSVARINESLRRSVSFKPLEGRYRVAILIDADRMRVEAANAFLKLLEEPGPQT
VFILTTSRPDHLLPTVRSRCQHLRFDPLPAEAIAQALVEREGVDEARAMVLARMADGSYS
RALDLLENEVLQADREQALAFLRQAYRFHSEALVDLVEQLSTLGRERLKGLLQLMLGWVR
DLVLFRTLGDGAELVNLDQQEAIRRFCQNLPEADLEGMARLLEEALELIERNVQPFLVLS
VLAAALRDAMHGRAPERLVPALDDPLALGLV
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcctgggagcgcattatcggacaggaacgcgtcgtcgaggcgttgcggcgggcgctc
gcgcagcagcgcgtggcccatgcctatctgttctacggccccgacgggacgggcaagcgg
gcggccgcgctgacgttcgcgcaggcgctgcagtgcgagcggggcggtagcgatccgtgc
ggccagtgcgtgccctgcaccaaggtgcggcgcctgattcacccggacgttcaggtgatg
ctgccgcatcccagcgacgccgacccggacgacctctacgaacgcttgcaacggctggcc
gccgagccctacgccaccgtggattacattcgccggcccgtgctggacgacccgacgcgg
gcctccaacaagcaggcgttctattccgtggcccgcatcaacgaatcgctccggcgtagc
gtcagcttcaaaccattggaaggccgctacagagtcgccatcctaatcgacgccgaccgg
atgcgcgtcgaggcggccaacgccttcctgaagctgctggaagaaccgggaccgcagacg
gtcttcatcctgaccacgtcccgtcccgaccatctgctgcccaccgttcgctcgcgctgc
cagcacctccggttcgatccgctgccggccgaggcgatcgcgcaggcccttgtggagcga
gagggggtggacgaagcgcgggccatggtgctggcgcgcatggccgatggctcctacagc
cgggcgctcgacctgctcgaaaacgaagtgctgcaggccgaccgcgagcaggcgctggcc
ttcctgcgccaggcctatcgcttccatagcgaggcgctggtcgatctggtggagcagctg
agcacgctggggcgcgagcgcctcaagggattgctgcagctcatgctgggctgggtacgc
gacctggtgctgttccggacgctcggcgacggggccgagctggtcaacctggaccagcag
gaggccatccgccgcttctgccagaacctgcccgaggccgacctggaaggcatggcccgg
ctgctcgaagaagcgctcgagttgatcgagcggaacgtgcagccgtttctggtgctgagt
gtgctggccgccgcgctgcgcgacgccatgcacggccgggcaccggaacgcctggtgccg
gcgctggacgatccgctggcgctcgggctggtctga
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