Rhodothermus marinus SG0.5JP17-172: Rhom172_0627
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Entry
Rhom172_0627 CDS
T01606
Name
(GenBank) transcriptional regulator, XRE family
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmg03000
]
Rhom172_0627
Transcription factors [BR:
rmg03000
]
Prokaryotic type
Helix-turn-helix
XRE family
Rhom172_0627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_31
HTH_3
HTH_19
Peptidase_M78
HTH_25
HTH_26
ScfRs
HTH_73
Sigma70_r4
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AEN72565
LinkDB
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Position
711211..712728
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AA seq
505 aa
AA seq
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MELNADLVRFALGLKLKALRQQRGLTLQDVASRAGLSVSYLSEIEKGKKFPKPDKLIDLA
SVFSVSYEELISPRLDERLDPLAAVFSSAFVQEFPFELFGLTPEDLFQLFTDQPTKAGAL
VRTFLEIGKMYDVQVEHFLFAALRSYQQLHNNYFPELEEAARAFRARYDLPAGEPIPPER
LRRILEADYGYRIDTETLPRHPVLQGFRSVFAEGPQPVLFVNGRLLPAQQAFILARELGY
RFLDLKERAITSSWLRVESFDQVLNNFRASYFAGALLLDETTLCADLRTFLSYPHWDGAV
LRAFLKRYGATPEMLCYRLTELLPQHFGLRELFFLRLFHRPGTDRFQLTKVFNLSRVPVP
HGIGLGEHYCRRWVAIQLLRRLAAQTPPPDPGDDPLVAAARMHFMNEDATFFTIALARPL
VLTPEQNACVAIGFLLDAHCREQVHFAQDPALPDLEVNLTCERCPLADCAERAAEPEVYR
AQQAQREREAALEALLEAMRRGQLP
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggaactcaacgccgacctggtacgcttcgccctcggcctgaaactcaaagcgctccgc
cagcagcgcggcctgacgctccaggatgtggcctcgcgggccggcctctccgtttcctac
ctgagcgagatcgaaaagggcaaaaaatttcccaaacccgacaaactcatcgacctggcc
tcggtcttttccgtctcctacgaggaactgatctcaccccgcctcgacgaacggctcgac
ccgctggccgcggtcttttcgtccgccttcgtgcaggagtttcccttcgagctgtttggc
ctgacgcccgaagacctcttccagctcttcacggaccagcccacgaaggccggggcgctc
gtgcgcaccttcctggaaatcgggaagatgtacgacgtgcaggtggagcacttcctgttt
gccgcgttgcgctcctaccagcagttgcataacaactactttcccgaactggaagaggcc
gcgcgcgcatttcgggcccgctacgacctgcccgccggtgaaccgatcccgcccgagcgc
ctgcgtcggatcctggaagcagactacggctatcggatcgacacggagacgctcccgcgt
catcccgtgctgcaaggctttcgctccgtctttgccgaggggccgcagccggtactgttc
gtcaacggacgcctgctgccggcgcaacaggcgttcatcctggcccgggaactgggctac
cggtttctggacctgaaggagcgggcgatcacctcatcctggctgcgcgtcgagtcgttc
gatcaggtgctcaacaacttccgggcttcctacttcgccggggcgttgctgctcgacgaa
accacgctctgcgccgatctgcgcacgttcctgagctatccgcactgggacggggctgtg
cttcgggccttcctgaagcgctacggcgccacgcccgaaatgctctgctaccggctgacc
gaactcctgccgcagcacttcggcctgcgggagctctttttcctgcggctgttccatcgg
ccgggcaccgatcggttccagctcacgaaggtcttcaacctgtcgcgcgtcccggtgccg
cacggcatcgggctgggcgagcactactgtcgccgctgggtggccattcaactgctgcgc
cggctggccgcgcagacgcccccgccggatccgggggacgatccgctggtggcggcggcc
cgcatgcacttcatgaacgaggacgccacgttcttcaccatcgcgctggcgcgtccgctg
gtgctcacgcccgagcagaacgcctgtgtggcgatcggctttctgctggacgcgcattgc
cgcgagcaggtgcattttgcgcaggatccggcgctcccggatctggaggtcaacctgacc
tgcgagcgctgcccgctggccgactgcgccgaacgggcggccgagcccgaagtataccgg
gcccagcaagcgcagcgggaacgagaagccgcgctggaggcgttgctcgaagcgatgcgc
cgaggacagttgccctga
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