Rhodothermus marinus SG0.5JP17-172: Rhom172_0656
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Entry
Rhom172_0656 CDS
T01606
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Pathway
rmg00550
Peptidoglycan biosynthesis
rmg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rhom172_0656
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rmg01002
]
Rhom172_0656
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rmg01011
]
Rhom172_0656
Enzymes [BR:
rmg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Rhom172_0656
Peptidases and inhibitors [BR:
rmg01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
Rhom172_0656
Peptidoglycan biosynthesis and degradation proteins [BR:
rmg01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Rhom172_0656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
AEN72593
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All DBs
Position
complement(741367..742800)
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AA seq
477 aa
AA seq
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MRFVHLLYVALLVALSTTGLHAPASLEARLEDVRAHLSTEQAFWGLYVADVKSDQVLVAQ
NAEQGLLPASTHKLLTTAAALDLLGPDYRYQTVLYFVGQVDGATLRGDLILRGSGDPTFG
SPSWPGPDPLRTWAQELARMGIRRIEGRLIGDDNRFDDRPYADGWDIDYVTTQINLGLGF
AVGGLSYHDNIVRLRMQATRPGAPLAFTQEPFDYLTIENRAYTAARRYGEAIRIERAFAS
EQVRLTGSVPATYRGTIELPVANPTRYALAAFRHYLEQAGITVAAELFDVDELPAPPRYD
RRQALLVHFSPPLAEIVRVINHRSHNFYAEQVFRTLSPDGSAEGAARRIRAFLQRQGINT
RGLTIRDGSGLSRKNLVPPAVLGQLLVAMQHHPSRDAFVASLPQGGTRRSTLEDRLHGVP
VRAKTGSLLHVRTLSGYLTTRDGRTLAFALMANNFTTSPSRIVRTLDEMVRTLHTAP
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttgttcacctgctgtacgtcgccctgctggtggccctgagcacgaccggcctg
cacgcgccggcctccctcgaagcccgcctggaagacgttcgcgcccacctgtccaccgaa
caggctttctggggcctgtacgtcgccgacgtgaaaagcgaccaggtgctggtggcgcag
aacgccgagcaggggttgcttccggcctccacgcacaaactgctcaccacggcggccgcc
ctggatctgctgggaccggactaccgctatcagaccgtcctgtacttcgtcggtcaggtg
gacggcgccacgctgcgcggcgatctgatcctgcgcggctcgggcgatcccaccttcggt
agcccctcctggccgggccccgacccgctccgaacctgggcgcaggagctggcccgcatg
ggcattcgccgcatcgaaggccgcctcatcggcgacgacaaccgcttcgacgaccgcccc
tacgcggacggctgggacatcgactacgtgaccacgcagatcaacctggggctgggtttt
gccgtcggcggcctgtcgtaccacgacaacatcgtacggctgcgcatgcaggccacgcgg
ccgggcgcaccgctggcgttcacgcaggagcccttcgactatctgaccatcgagaaccgg
gcctatacggccgcccgacgttacggcgaggccatccggatcgagcgggcgttcgcctcc
gagcaggtgcggctgaccggttcggtcccggccacgtaccggggtacgatcgaactgccc
gtcgccaatccgacccgctacgcgctggcggctttccgccattacctggagcaggcgggt
atcaccgtggcggccgagttgttcgatgtggacgaactaccggcaccgccccgctacgac
cgccgccaggccctgctcgtacacttttcgcccccgctggccgagatcgtgcgcgtcatc
aaccaccggagccacaatttctatgcggagcaggtctttcggacgctcagtccggacggc
tcggccgaaggagccgcccggcgcatccgcgccttcctgcagcgccagggcatcaatacc
cgcggactgaccatccgggacggctcggggctttcccgcaagaacctggtcccgccggcc
gtgctgggccagttgctggtggccatgcagcaccatccgagccgcgacgccttcgtggcc
tcgcttccgcagggcggcacgcgcaggtcgacgctggaagacaggctgcacggcgttccg
gtccgggccaaaaccggttcgctgctgcacgtgcgcacgctgagcgggtacctgaccacc
cgcgacggccgcacgctggcttttgccctgatggcgaacaacttcaccacatcgccttcc
cggatcgtgcgcacgctcgacgaaatggtccgtacgctgcacaccgctccctga
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