Rhodothermus marinus SG0.5JP17-172: Rhom172_0814
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Entry
Rhom172_0814 CDS
T01606
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Pathway
rmg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Rhom172_0814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmg03400
]
Rhom172_0814
Enzymes [BR:
rmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rhom172_0814
DNA repair and recombination proteins [BR:
rmg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Rhom172_0814
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
WHD_PriA_bact
AAA_30
AAA_16
MarR_2
PIF1
TrwB_AAD_bind
AAA_19
T2SSE
WHD_DprA
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AEN72747
LinkDB
All DBs
Position
complement(927822..930308)
Genome browser
AA seq
828 aa
AA seq
DB search
MTASPDIVQVALPLPLMQVFSYRLPPEWREAVRSGCRVLVPFGRRHLTGVVVPEPPPDPL
PSPLKPILDILDDTPALTDELLQLTRWMADYYVCGWGEVIRAALPPGLEIESRRRLYPGH
PPAEPPGERAAAVLRFVAEHPGTTIRRLRQELRFASYALLHRLVARGWLQLEESLEPPRV
QIKKEQHVRFAPAYRTPAAQEAVLEKLRGARQRALVTALQALRLEGVSEPTRAELLARAD
ASPATLRRLVELGVLELVEKEVIRSPLEAEPVPEAAPVTFHPEQQAALERITEAIEARRF
ETFLLHGVTGSGKTEVYIAALKRVRAQGRTGIILVPEIALTPQTVRRFRAHFGDEVAVLH
SRMSDGERYDTWRQLRAGRYPIVIGPRSAVLAPLANLGLIVVDEEHERSYKQFNPAPRYH
ARDVAVYRAYLNGAVCVLGSATPSLESYLNARSGKYTLLEMRRRAPAVGRTPARLPSVRL
VDLRHTRLVNGNPLAPPLARAIAQRLERGEQVILLQNRRGFAPVLECAECGWSPHCPHCS
VTLTYHKVQHQLRCHYCGYATRHPGTCRQCGAAALEPLGIGTQRVEEALRALFPEARVLR
MDLDTTRGRRAHHRLLDRFARGEADILLGTQMVAKGLDFPRVTLVGVVNADTGLLLPDFR
ADEHTFQLLMQVAGRAGRADRPGEVLLQTRNPDHRVFRYLLRHDYVGLARELLAERRQLG
YPPYARLAVVECSGPDEARVAELARSWTEHFQQVCHQHAGGHLIDTLGPTPALHERLKGR
YRYHVLVKVPRRTGAPPLQPLLRQALETFPPLPRAYRLTLDIDPAGLS
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgacggcttcgcccgacatcgtgcaggtcgcgctgcccctgccgctgatgcaggttttt
tcctaccggcttcccccggaatggcgggaagccgtgcgatcgggctgccgggtgctggta
cccttcgggcggcgacacctgaccggcgtggtggtgcccgagcccccacccgatccgctc
ccttcgccgctcaagcccatcctggacatcctcgacgacaccccggcgctgaccgacgag
ctgctccagctgacgcgctggatggccgactattacgtgtgcggctggggcgaagtcatc
cgcgccgcgctgcctcccggcctcgaaatcgaaagccgccgccgcctgtatcccggccat
ccgccggcggagccgcccggcgagcgcgcggcggccgtgctccgcttcgtggccgagcat
ccgggcaccaccatccgccgcctgcgccaggagctgcgcttcgcttcctacgccctgctg
caccggctggtcgccagaggctggctccagctcgaagaatcgctcgaacccccgcgcgtc
cagatcaaaaaggaacagcacgtgcgctttgcgccggcctaccggacgcccgccgcccag
gaagcagtgttggaaaaactgcggggcgcccgtcagcgggcgctcgtcacggccctgcag
gcgctacgactggagggcgtctccgagcccacccgggccgaactgcttgcccgcgccgac
gcttcgccggccacgttgcgccggctggtcgagctgggcgtgctggaactggtcgaaaaa
gaagtgatccgctcgccgctggaagccgagccggtgcccgaggccgccccggtcacgttc
cacccggagcagcaggcggcgctggagcgcatcaccgaagcgatcgaggcgcggcgcttc
gagacgtttctgctgcacggcgttaccgggagcggcaagaccgaggtgtacatcgccgcg
ctgaaacgcgtgcgcgctcagggacggacgggcatcatcctggtgcccgaaatcgccctg
acgccccagacggtgcgacgcttccgcgcccacttcggcgacgaagtggccgtgctgcac
tcgcgcatgagcgacggcgagcgctacgacacctggcgtcagctccgcgccggccgctac
cccatcgtgatcggtccgcgctcggcggtgctggctccgctggcaaacctggggctgatc
gtggtcgacgaagagcacgagcgctcctacaagcagttcaatccggctccgcgctaccat
gcccgcgacgtggccgtctatcgcgcttacctgaacggggccgtgtgcgtgctcggctcg
gccacgcccagtctcgaaagctacctgaacgcccggagcggcaagtacacgctgctggaa
atgcgtcggcgggcgccggccgttggccgcacaccggcccggctgccgagcgtccgcctc
gtcgatctgcgccacacgcgcctggtcaacggcaatccgctggcgccgccgctggcgcgg
gccattgcgcaacgcttagaacgtggcgagcaggtcatcctgctgcagaaccgtcggggc
ttcgcacccgtgctggagtgcgccgaatgcggctggtcgccccactgcccgcactgctcc
gtcacgctcacctaccacaaggtgcagcaccagttgcgctgccactactgcggctacgcc
acacgacacccgggcacctgccggcaatgcggtgcggcggcgctcgagccgctgggcatc
ggcacgcaacgcgtcgaagaagcgctgcgtgcgctgtttccggaggcccgcgtgctccgc
atggacctcgacaccacgcgcggccgccgcgcccaccaccggctgctcgaccgcttcgcc
cgtggcgaggccgacatcctgctcggcacccagatggtcgccaaggggctcgactttccg
cgcgtgacgctcgtgggcgtggtcaacgccgacacgggcctgctgctgcccgacttccgc
gccgacgaacacacctttcagctcctgatgcaggtggccggacgcgccggccgcgccgat
cgccccggcgaggtgctgctccagacgcgcaaccccgatcaccgcgtcttccgctacctg
ctccggcacgactacgtcgggctggcacgcgagctgctggccgaacggcgacagctcggc
tatccgccctatgcccggctggccgtggtcgagtgcagcggccccgacgaagcgcgcgtg
gccgagctggcccggagctggaccgaacactttcagcaggtgtgccaccagcacgccggc
ggccacctgatcgacacgctgggccccaccccggcgctgcacgaacgcctcaaagggcgc
tatcgctaccacgtgctcgtcaaggtgccccgccgcaccggggcgcccccgcttcagccg
ctgctccgtcaggcgctggagacctttccgcccctgccccgtgcctatcgcctcacgctc
gacatcgacccggccgggctgagctga
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