Rhodothermus marinus SG0.5JP17-172: Rhom172_1022
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Entry
Rhom172_1022 CDS
T01606
Name
(GenBank) TonB-dependent receptor plug
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rmg02000
]
Rhom172_1022
Transporters [BR:
rmg02000
]
Other transporters
Pores ion channels [TC:
1
]
Rhom172_1022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
CarboxypepD_reg
PEGA
SpaA
Dockerin_1
fn3_3
Motif
Other DBs
NCBI-ProteinID:
AEN72952
LinkDB
All DBs
Position
1169513..1172956
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AA seq
1147 aa
AA seq
DB search
MATRQRLFWKRIEACRLWLLVLGVLLLGAGQVRAQQTEARTASKVDTPIAWLNDPYLENA
ARLSQPLRLTLEQVTREQALRIIAQQAGLRLSYEWSEAMNEPVTLRQSQGTVLDALYAVT
AGTDLRLMITRSGYLLVGRAPKSSAETAEPAPVQQEGSIAGRVIDAATGEGLPGVNVFLV
GTTLGASTDIDGNYRIDNIPAGLYTLQASFIGYRTATVDSVEVRAGEVTVVNLALEQEVL
GLEEIVVVGYGTQRRRDVTGAVSSVNVESLQELPVTNVVEALQTRAPGVRVITSDGRPGG
SGLEVQIRGARSLTASNQPLFVIDGVPVEGVNLSELNLSDIVSIEVLKDASAAAIYGARG
SNGVVLITTRRGREGEGRFSYDGSIGFSEIANPLDVFSGPEFIALRREAYRAAGMPTDDE
TIMDPVEREVAQSGQYVDWQEAVLRTGVRHNHNLSYSGGSDVFQVYASGGYLREEGILKR
TFFERGTFRLNTDYRPISWLKFTTNFLLARTKQDVAGGERYGPFWTAYTLSPLGKIYDEQ
GRLRPFVTGDPTAWNPLYQLQESRDDRWSTRVLGNLVAQVNLYEGLNYQLNAGMDYNATK
MGEYRTSNYSGGGQQRAVLGYGESTSYTIENILTYERQLGTLHNLHATLLYSVQRVQDED
LQAQTRNLPSDLLDYNAISSGADLRSPTRNYSAWSLESYMARLRYSFADRYLLTLTGRID
GSSKFGAGNKYGFFPAVAFAWQLSQEPFLASVRQIDNLKLRLSWGQTGNQEIPIYQSLGQ
TSLFSYSFGGNIVKGYAPASLPNPNLKWEKTTQFNLGLDASLFGGRIMSTIDLYRSWTSD
LLLQRQIPVTNGFTSFLDNIGKTENWGIDFSLDTYLINRPDFSWQVNLNWSLSRSKIVRL
TGQTDEAGNPVDDIANRWFIGHPIGVIYDWVFDGIFCSGGPYDEAACQQEIASSAQPDAQ
PGDIRVKDLNGDGVINDQDRAIVGTTEPDWYGGLGTTLTYKNFDLSLFFTTVQGITRYNP
YIYPRAYDPNIVVQFLQGRNNQIKVDYWTPEDPDADFPRPNFRREMPRYLSARAIQDASY
VQLRNITLGYTLPKALAARLGVNRLRLYLSGNNLYYWTDFESYNPEQGDVEGYPVARTLT
FGVNLSF
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggctacccgtcaacgccttttctggaagcgcatcgaagcgtgccggttgtggttgctg
gtgctgggggtgttgctgctgggcgccggacaggtccgggcgcagcaaacggaggcccga
acggcttcgaaagtggacacgcccattgcctggctgaacgacccgtatctcgaaaacgct
gcgcgactcagccagcccctgcgtctgacactggagcaggtaacgcgcgagcaggcgctc
cgcatcattgcgcaacaggccggcctgcgcctttcctacgagtggagcgaggcgatgaac
gagcccgttacgctccgccagtcgcagggtaccgtgctggacgcgctctacgccgtgacg
gccggcaccgacctgcggctgatgatcacacgcagcggctacctgctggtcggtcgtgcg
ccgaagtcctcggccgaaacggcggagcctgctccggtccagcaggaaggaagcattgcc
gggcgcgtgattgacgcggccaccggggaagggcttcccggcgtgaacgtctttctggtg
ggtaccacgctgggagccagcaccgacatagacggtaactaccggatcgacaatatcccg
gccggtctctacacattgcaggcgtccttcatcggctaccggacggccacggtcgacagc
gtcgaggtgcgcgcgggcgaagtcaccgtggtcaacctggcgcttgagcaggaagtgctc
ggcctggaagaaatcgtggtggtgggctacggtacgcagcggcgtcgggatgtgacgggc
gccgtctcgtcggtgaacgtcgaaagcctgcaggagctgcccgttacgaacgttgtggag
gcgctccagacgcgggctcccggcgtgcgcgtgatcacttccgatgggcggccaggcggc
agcggcctggaagttcaaatccgaggcgctcgatcgctgaccgccagcaaccagccgctg
tttgtcatcgacggggtgcccgtcgaaggcgtaaatctgtccgaactgaatctgagcgac
attgtctcgatcgaagtgctgaaagacgcctcggcggcggccatctacggggcgcgtggt
tccaatggcgtggtgctcatcaccacgcggcgcggtcgcgaaggcgaagggcgcttttcc
tatgacggtagtatcggattttcagaaatcgccaatccgctcgacgttttcagcgggccg
gaattcattgcgctgcggcgcgaggcctatcgtgcggccggtatgcccaccgacgacgaa
acgattatggaccctgttgaacgggaggttgcgcagagcgggcagtacgtcgactggcag
gaggccgttctgcgtaccggcgtgcgtcacaatcataacctcagctattccggaggatcg
gacgtatttcaggtctatgccagcggcggctatctgcgcgaagaagggatcctgaagcgc
acgttcttcgaacgagggactttccggctcaacaccgactaccgcccgatttcctggctc
aagttcaccacgaacttcctgctggcccggaccaagcaggatgtggcgggcggcgaacgc
tacggccccttctggaccgcttatacgctgtcaccgctggggaaaatctatgacgagcag
ggtcggctgcggccttttgtaaccggcgacccgaccgcctggaatccgctctatcaactc
caggagtcccgcgatgatcgctggagcacgcgtgtgctcggcaatctggtggcccaggtc
aatctgtatgaaggcctgaattatcagctcaacgcgggcatggattacaacgcgaccaaa
atgggcgagtaccgcacgagcaactattccggcggtgggcagcagcgcgccgtgctgggt
tatggcgaaagcaccagctacacgatcgaaaacatcctgacctacgagcgacagctgggc
acgctgcataacctgcacgccacgctgctctacagcgtgcagcgtgtgcaggacgaagac
ctgcaggcccagacgcgcaacctgcccagtgatctgctcgattacaacgcgatcagcagc
ggggccgatctgcgctcgcctacccggaactattcggcctggagcctggagtcctacatg
gcccgcctgcgctacagcttcgcggatcggtacctgctgacgcttaccgggcgtatcgac
ggctcctccaagttcggggcgggcaacaagtacggcttcttcccggccgttgcctttgcc
tggcagctcagccaggaacccttcctggcctccgtgcgccagatcgacaacctgaaactg
cgcctgagctgggggcagaccggtaaccaggaaatcccgatctatcagtcgctcgggcaa
accagtctgttctcctattccttcggcgggaatatcgtgaaaggctatgcgcccgcctcg
ctcccgaaccccaacctgaagtgggaaaagaccacgcagttcaacctggggctggatgcc
tcgctttttggcgggcgcatcatgtccacgatcgacctctaccgctcctggacctcggac
ctgctgctccagcggcagatcccggtcacgaacggctttaccagcttcctggataacatt
ggcaagacggaaaactggggcatcgacttcagcctggatacctatctgatcaaccgtcct
gatttttcctggcaggtgaacctgaactggtcgctcagccgctcgaagatcgtccggttg
accggacagaccgacgaggcgggcaatccggtggatgacatcgccaaccgctggttcatc
ggacacccgatcggcgtcatctacgactgggtcttcgacggcatcttctgttcgggaggg
ccttacgacgaggcggcctgccagcaggagatcgccagcagcgcccagcccgacgcccag
cccggcgacatccgggttaaagacctgaatggcgatggagtaattaatgatcaggaccgg
gctatcgtggggactaccgagccggattggtacggcgggttggggacaactttgacttat
aaaaactttgatctgagcctcttctttacaactgtacagggcattacacgatacaacccc
tatatctatcctcgggcctacgaccccaatatcgtcgtccaattcctgcaggggcgtaac
aaccagatcaaagtcgactactggacgccggaagatccagatgccgacttcccgcgcccc
aatttcaggcgagagatgcctcgctatctctcagcgcgagccattcaggatgcttcatat
gtgcagttgcgcaacatcaccctgggttacaccttgccgaaagcgctggcagctcgcctt
ggagtgaaccggttgcgcctgtatctatccggcaataacctgtactactggacggacttc
gagtcctacaaccccgagcagggcgacgtcgagggctacccggtagcccggacgctgacc
tttggcgtgaatctgtccttctga
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