Rhodothermus marinus SG0.5JP17-172: Rhom172_1076
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Entry
Rhom172_1076 CDS
T01606
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Pathway
rmg00061
Fatty acid biosynthesis
rmg00071
Fatty acid degradation
rmg01100
Metabolic pathways
rmg01212
Fatty acid metabolism
rmg02024
Quorum sensing
rmg04146
Peroxisome
Module
rmg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rhom172_1076
00071 Fatty acid degradation
Rhom172_1076
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rhom172_1076
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rhom172_1076
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rmg01004
]
Rhom172_1076
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmg04147
]
Rhom172_1076
Enzymes [BR:
rmg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rhom172_1076
Lipid biosynthesis proteins [BR:
rmg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rhom172_1076
Exosome [BR:
rmg04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rhom172_1076
Exosomal proteins of breast cancer cells
Rhom172_1076
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AEN73006
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All DBs
Position
1241371..1243269
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AA seq
632 aa
AA seq
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MGERIYTAPPDTGTPVLGKTLPDVLYEALARYENPAFLNQPAGPGRWTPISLRDFAEQAE
ALALGLHAMGLERGAHVAFYMESDAYFCLADMACLIGGLIDVPIYLTHAPESIHYVIEHA
EARALVVSNRALLERVASLLRDLPGVRFVVVADATGLDTDRVEGRPLYTFAQLLEAGRQR
RAADPEAIARLRAQIRPGDLATIIYTSGTTGRPKGVMLSHENISFNALTSFSGIKQYRPG
PDGEVALSFLPLTHVFARTLFYGYLYYATSVYFTTPDALRDALRQVRPTTFATVPRVLEK
IYGALVERAATMPGLKGRIFRWALDLARRYELGREPRGLYRLQLAVADRLVYRKWREALG
GRIAFIIAGGAALSAELANIFAAAGIPILQGYGLTETSPVITYNRPELNRAGTVGVPIPG
VEVKIAEDGEILTRGPHVMLGYYKDPERTREVIDEEGWFHTGDIGYFTEEGFLVITDRKK
DLFKLSTGKYVMPQPLEQRLTADPLVEQALVVGPGYKFTAALIFPDEEALRRLARRLGLD
ANQPLEKLVREPKILEVYQQIVDRANEGMDPWATIKRFVLVPERLSIEEGTLTPTLKVRR
SALYKKYEAQIRALYEGAEAEAHEQEATTPES
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaacgcatttacacggcgccacctgatacgggcacaccggtgctcggtaagacg
ctgccggacgtgctctacgaggcactggcgcgctacgagaacccggccttcctgaaccaa
ccggccgggccggggcgctggacgcccatctcgctgcgcgattttgccgagcaggccgag
gcgctggcgctgggcctgcatgcaatgggactggagcggggcgcccacgtggccttctac
atggaaagcgacgcctacttctgcctggccgacatggcctgcctgatcggcggcctgatc
gacgtgcccatctacctgacgcacgcgcccgagtcgattcactacgtcatcgagcacgcc
gaggcccgcgcgctcgtcgtctcgaaccgagcgttgctcgaacgcgtcgcgtcgcttttg
cgcgacctgcccggcgtgcggttcgtcgtggtggccgacgcgaccggactggacacggac
cgggtggaagggcggccgctctacaccttcgcccaattgctggaagcagggcgacagcgc
cgtgcggccgatccggaggctatcgcgcggctgcgggcgcagatccgtccgggcgacctg
gccaccatcatctatacgagcggcacgacggggcggcccaagggcgtgatgctctcccac
gaaaatatttcgttcaacgcgctcacgtctttcagcgggatcaagcagtaccggccgggg
ccggacggcgaggtggccctgtcgtttctgccgctgacgcacgttttcgcccggacgctc
ttctacggctacctgtactatgccaccagcgtctatttcacgacgcccgacgccctgcgt
gacgcgctccgtcaggtgcggcccacgacgttcgccacggtgccgcgcgtgctcgagaag
atctacggggcgctggtggagcgggcggccaccatgcctggcctgaaggggcggatcttc
cgctgggcgctggacctggcccggcgctacgagctggggcgcgaaccacgggggctgtac
cggctgcaactggccgtggccgaccggctggtctatcgcaagtggcgggaggccctgggc
gggcgcatcgccttcatcatcgcgggcggggcggccctttcggccgaactggccaacatc
ttcgctgcggccggtatcccgatcctgcagggctacggcctgaccgaaacaagcccggtc
atcacctacaaccgccccgagctgaaccgggccggcacggtgggcgtgcccattccgggc
gtggaggtgaagatcgccgaggacggcgagattctcacgcgcggtccgcacgtcatgctg
ggctactacaaggacccggagcgcacgcgcgaggtgatcgacgaagaagggtggtttcac
acgggcgacatcggctacttcaccgaagaaggttttctcgtcatcaccgaccgcaaaaaa
gatctgttcaagctctcgacgggcaagtacgtgatgccccagccgctggagcagcgcctg
acggccgacccgctcgtcgagcaggcgctcgtggtgggacccggttacaagttcacggcg
gcgctcattttcccggacgaggaagcgcttcgacggctggcgcggcggctcgggctcgac
gccaaccagccgcttgaaaagctggtgcgcgagccgaagatcctggaagtctatcagcag
atcgtcgatcgtgccaacgagggcatggacccctgggccacgatcaagcgctttgtgctg
gtccccgagcgactctccatcgaagagggcacgctgacgcctacgctcaaagtgcggcgc
tcggcgctctacaagaaatacgaggcccagatccgggcgctctacgagggcgccgaggcc
gaagcacatgaacaggaagcgacaacccctgaatcctga
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