Rhodothermus marinus SG0.5JP17-172: Rhom172_1251
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Entry
Rhom172_1251 CDS
T01606
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Pathway
rmg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Rhom172_1251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmg03400
]
Rhom172_1251
DNA repair and recombination proteins [BR:
rmg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Rhom172_1251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
AEN73178
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Position
1431218..1433914
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AA seq
898 aa
AA seq
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MASREAEKQVGQTPLMRQYYKIKSRYPNAILLFRMGDFYETFDEDAHIVSRVLGITLTKR
SNGQAADVPLAGFPHHALDNYLPKLVRAGYRVAICEQLEDPKFARKVVKRDVVEVVTPGV
SFHEHLLDPKRANYLAAVVWGTERGERDRIGFAFLDASTGEFSVTEAPAHRLEDLLQTIQ
PAEVLVDKRQRDRLQSVRGLSFVVTPQEDWVFNFDYAYEVLLRHFKTHSLKGFGVDDLRL
GLRAAGAALHYLGETQKGRLPHVRRLTRYVTDEYMVLDPQTKRNLELVASLQDGTQEGSL
VQILDETLTPMGGRLLRRWLLRPLKNVRQIEKRLEAVEALVRDRRLRERLREELRQVGDL
ERLAARVCTGRATPRDLMHLRLTLEQIPPIKQALADVSCDTLRRLAEQLTLCTQVVERIR
QALVDDPPASLSDGGVIRDGFSAELDELREIARSGKDFIARLQQKEIERTGIPSLKVGFN
KVFGYYIEVTNAHRNKIPPHYIRKQTLVNAERYITPELKEYEEKILSAEEKIASLEAELF
NRLRLEVAEATAELQLNASLLAMLDVFCSLAEVADRYGYTRPELHEGTELLIEEGRHPVV
ERTLPPGEPFIPNDIYLDTHAQQILIITGPNMAGKSVVLRQTGLIVLLAQIGSFVPARRA
RIGIVDRIFTRVGASDNLAAGESTFLVEMNETANILNNATPRSLILLDEVGRGTSTFDGL
SIAWALVEYLHETPSVAARTLFATHYHELNELAERFPRVKNFRVQVEEHDGRVIFLHKLV
PGGADHSYGIEVARMAGLPEPVIARAREILRHLEAQHLVVEAPAGDGEPVRPVRARRAER
IPADTSAFQLSLFAQPEPDPVAEELKERLRRIDPNRMTPIEALLLLDELKRLVERHDS
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagagaagcggagaagcaggtggggcagacgccgctcatgcggcagtactac
aagatcaagtcccgctatccgaacgccatcctgctgtttcggatgggggacttctacgag
accttcgacgaagacgcgcacatcgtcagccgggtgctgggcatcacgctgacgaagcga
tccaacggtcaggcggccgacgtgccgctggcgggctttccgcaccacgcgctggacaac
tacctgccgaaactggtgcgggccggctatcgggtggccatctgcgagcaactcgaagat
cccaaattcgcccgcaaggtcgtcaagcgcgacgtcgtcgaggtcgtcacgccgggcgtc
tcgttccacgagcacctgctcgatcccaagcgggccaactacctggccgccgtggtctgg
ggtaccgaacggggcgagcgtgaccgcatcggctttgcctttctggacgcctcgacgggc
gagttttcggtcacggaggcgccggcccatcgcctggaagatctgctgcagacgattcag
ccggccgaggtgctcgtcgataaacgccagcgtgaccgactgcagagcgtgcggggcctt
tcgtttgtcgtcacaccccaggaggactgggtcttcaacttcgactacgcctacgaagtg
ctgctccggcacttcaagacgcattcgctcaagggctttggcgtcgatgacctgcggctg
gggctccgggcggccggggcggcactgcactacctgggcgagacgcagaaaggtcggctg
ccccacgtgcgtcggttgacgcgctacgtcaccgacgaatacatggtgctcgatccgcag
acgaagcgcaacctggagctggtcgcctcgctgcaggacggcacgcaggaaggctcgctc
gtgcagatcctcgacgagacgctcacgccgatgggcggccgactgctccggcgctggctg
ctgcggccgctcaagaacgtacgccagatcgaaaagcgcctggaggccgtcgaggcgctt
gtgcgcgatcgccggctccgtgagcgcctgcgcgaggaactgcgccaggtgggcgacctg
gagcgactggccgcccgcgtctgcaccggacgcgccacgccgcgcgatctgatgcacctg
cgactgacgctcgaacagatcccgcccatcaagcaggcactggccgacgtgtcctgcgac
acgctgcgccgactggccgaacagctcacgctctgcacgcaggtggtcgagcgcatccgc
caggcgctcgtcgacgatccgccagcctcgctgagcgacggcggcgtgattcgcgacggc
ttcagcgccgagctggatgaactgcgcgagatcgcccgctccggtaaggacttcatcgct
cgcctgcagcagaaagagatcgagcgcacgggcatcccgtcgctcaaggtgggcttcaac
aaggtgttcggctattacatcgaagtcaccaacgcccaccgcaacaaaatcccgccgcat
tacatccgcaagcagacgctggtcaatgccgagcgctacatcacgccggagctgaaagag
tacgaggaaaaaattctctcggccgaggagaagatcgccagcctggaggccgagttgttc
aaccggttgcgtctggaggtggccgaggcgacggccgagctgcagctcaacgcgtcgctg
ctggccatgctcgatgtgttctgcagcctggccgaagtggccgatcgttacggctacacg
cgaccggaactgcacgagggcaccgagctgctcatcgaagaaggccgccatccggtggtc
gagcgtacgctaccgcccggcgagccgttcatcccgaacgacatctacctcgacacgcac
gcgcagcagatcctgatcatcacgggaccgaacatggccggcaagagcgtggtgctgcgc
cagaccggcctgatcgtactgctggcgcagatcggttcgttcgtgccggcccgccgcgcc
cgcatcgggatcgtcgatcgcatcttcacgcgtgtgggcgcttcggacaacctggccgcc
ggcgagagtacgtttctcgtcgaaatgaacgagacggccaacattctcaacaatgccacg
ccgcgctcgctgatcctgctcgacgaggtggggcggggtacttcgacgttcgacgggctg
tcgatcgcctgggcgcttgtcgagtacctgcacgagacgccctcggtggccgcgcgcacg
ctgttcgccacgcactaccacgaactgaacgaactggccgaacgcttcccgcgcgtgaag
aacttccgcgtgcaggtcgaggagcacgacggccgggtgatctttctgcacaaactggtg
ccgggcggggccgaccattcctacggcatcgaggtggcccgcatggccggattgcccgag
ccggtcattgcgcgcgcccgtgagatcctgcgccatctggaggcgcagcaccttgtggtc
gaagcaccggccggcgacggcgagcccgtgcgtcccgtgcgggcacgacgggccgaacgc
attcccgccgacacgtcggccttccagctttcgctctttgcgcaacccgagcccgatccg
gttgccgaggagctcaaagagcggctgcgccggatcgatcccaaccgcatgacgcccatc
gaggccctgctcctgctcgacgaactcaagcggcttgtggaacgccatgattcgtga
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