Rhodothermus marinus SG0.5JP17-172: Rhom172_1301
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Entry
Rhom172_1301 CDS
T01606
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmg03400
]
Rhom172_1301
DNA repair and recombination proteins [BR:
rmg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Rhom172_1301
Archaeal homologous recombinant proteins
Rhom172_1301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
Rad50_zn_hook
ATG16
AAA_29
AAA_27
OVT1
ABC_tran
AAA_21
YgzA
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AEN73228
LinkDB
All DBs
Position
1492326..1495385
Genome browser
AA seq
1019 aa
AA seq
DB search
MVPVALRLKNFMSYGEAAPVLDFEQFQVACLSGNNGQGKSALLDAITWALWGEARKTSDS
RKPDEHLLRVGAQQMEVEFTFDLEGQRYCVLRRYTRSSSGKTSKSELELQVYEPETGTYR
ALTASSVSETQERLNQLLGLDYQTFINASFLLQGRADEFTRKKPSERKEILARILNLDRY
ERLAELAREEVREAKARAEQIERQLEQIQEALQEESALKTRHEALRERRHALEAERTAHQ
QQLQAHQERRVRLEESRRRLEELQEQQRQQTVRLQEERERLVRLEAELQDLEQLLARRKE
IEQAHARERALQEERRRLEAKREQHWGIQKQLDQVQSELERRRSELEKKLALTHKEQEHV
QRQLQELAARLQERPRIEQRLKAAEQALQEKARLEAQRQQRKKLEEEIQKVSEALLAAQK
ELEGQLASLQRQLEQEADVPEQLAALEARCQALEQEEARYRALHEELERLKETGQGKAAA
IEALQARLQELERQQQELQQRYDTFRQAEADECPVCGSELGPEHRQEVERHYEEQLETLA
RGLAEGRRQLAELEQEREALRQQYRARLAEAKQLEKAPEELARTRAQLEELRRRNARREA
LARQVSALKLQLEQRAFAQEHRRRLEELHRQLDAIPFDERRFEALAQQAAEAASLRERLQ
ELEALQGRRESLENEQRRLAQLEQQYRQELDHGEALQQLLQRKRELQEKLQAIGFDPARL
QQVQQELEALSDVGAQVHRLLHAEENLKKGRQEREALQRRIRQEEQAVERLRAQMQQLGQ
ELEELPGVQAACEAAQQQLAATEEALRQVQQEIGECQARLEQLQALRTQRKQLQQELESV
RHRERLHRHLQQAFGKHGIPSLIIEQTLPELEARANELLERLTDGRMHVYLRTQRAKKSG
GTKETLDIIITDEQGAARPYETFSGGEAFRVDFALRLALAQLLAERSGVRVRTLVIDEGF
GTQDPQGLQHLVEAIQAVQSDFDKILVITHLSELKQVFPVRIEVEKDPVEGSRFEVIGV
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggtaccggtcgcgttgcgcctcaagaacttcatgagctacggggaggcggcgcccgtg
ctcgatttcgagcagtttcaggtggcctgtctgtcgggcaacaacggccagggtaagtcg
gcgctgctggacgcgatcacctgggcgctctggggcgaggcgcgcaagacgagcgacagc
cggaagcccgacgagcacctgctgcgcgtgggagcgcagcagatggaggtggagttcacc
ttcgatctcgaaggccagcgctactgcgtgctccggcgctacacgcgctccagctccggc
aaaaccagcaagtcggagctggagctgcaggtgtacgaaccggagaccggcacctaccgg
gcgctgacggcatcttcggtttccgaaacgcaggaacggctcaatcaactgctggggctc
gactatcagacgttcatcaacgcctcgtttctgctgcaggggcgggccgacgagttcacg
cgcaaaaaacccagcgagcgcaaggagatcctggcccgcatcctgaacctggaccgctac
gagcggctggccgaactggcgcgggaagaggtgcgtgaggcgaaggcgcgggccgagcag
atcgagcgccagttggagcagattcaggaagcgttgcaggaggagtccgcgctgaagacc
cggcacgaagcacttcgcgagcgccgccacgcgctggaggccgagcgcacggctcaccag
cagcaattgcaggcccatcaggaacggcgcgtgcgcctggaggagagccgccgccgcctg
gaagaactgcaggagcagcagcgtcagcaaacggtccgcctgcaggaggagcgggaacgg
ctggtccggctggaggccgaactgcaggacctggagcaactgctggcgcgacgcaaggag
atcgagcaggcccatgcccgcgaacgcgcgctccaggaagagcgtcgccggctcgaggca
aagcgcgagcagcactggggcattcagaagcagctggatcaggttcagagcgagctggag
cgccggcgaagcgaactggagaaaaagctggcgctaacgcacaaagagcaggagcacgtc
cagcgccagctgcaggaactggccgcacggctgcaggagcgtccccggattgaacagcgt
ctgaaggcggccgagcaggcgctgcaggagaaggctcggctcgaagcgcagcgccagcaa
cgaaaaaagctggaggaggaaattcagaaggtctccgaagcgttgctggcggcgcagaag
gagctggagggacagctggcctcgctgcagcgccagctggaacaggaggccgatgtgccg
gagcagcttgccgcgctggaggcccggtgccaggcgctggagcaggaggaagcccgttac
cgggcgctgcatgaagaactggagcgactgaaggagacggggcagggcaaggcggcggcg
atcgaagcgctgcaggcacgtctgcaggagctggagcggcagcagcaggagctgcagcag
cgctatgatacgttccggcaggccgaagcggatgagtgtccggtctgtggcagcgagctg
gggcccgagcaccggcaggaggtcgagcgccactacgaagaacaactggagacgctggcg
cgcgggctggccgaagggcgtcggcaactggccgagctggagcaggagcgagaagcgctc
cggcagcaatacagggcccggcttgcggaagcgaagcagctggagaaggcgcctgaggag
ctggcgcgtacgcgcgcgcaactggaggaactgcggcggcgcaatgcccgacgggaggcg
ctcgcgcgtcaggtgtcggcacttaagctgcagcttgaacaacgcgccttcgcgcaggaa
caccggcgtcggctggaggaactgcaccggcaactggacgccattccattcgacgaacgg
cgtttcgaggcgctggcgcaacaggcggccgaggctgcttcgctccgcgaacggctgcag
gagttggaggcgttgcaggggcggcgcgaaagcctggaaaacgagcaacggcgcctggcg
caactggagcagcagtaccgtcaggaactggaccatggtgaggcgctgcagcagcttctg
cagcgcaagcgtgaacttcaggaaaagcttcaggcgatcggcttcgatccggcgcgtctg
caacaggtccagcaggagctggaggcactgagcgacgtcggcgcgcaggtgcatcgattg
cttcatgcggaggaaaacctgaaaaaaggccggcaggagcgggaggcgctgcagcggcgc
atccgccaggaggagcaggcggtggagcggttgcgggcgcagatgcagcagctcgggcaa
gagctggaggagcttcccggtgtgcaagcagcctgtgaagcggctcagcagcaactggcg
gccacagaggaggcgctgcggcaggtacagcaggagatcggcgagtgtcaggcgcggctg
gaacaactgcaggcgcttcgcacgcagcgcaaacagcttcagcaggagctggaatcggta
cggcatcgggagcggctgcaccggcacctgcagcaggccttcggcaagcatggcattcct
tcattgatcatcgaacagacgcttcccgaactggaggcccgcgccaacgaattgctcgag
cggctgaccgacggccgcatgcacgtttacctgcgcacgcagcgcgccaaaaagtccggg
ggcaccaaagagacactcgacatcatcatcaccgacgagcagggcgcggcccgtccctac
gagaccttctccgggggcgaggccttccgcgtcgattttgcgctgcggctggcgctggcc
cagctgctggccgaacgcagcggcgtgcgcgtgcgcacgctggtcatcgacgaaggcttc
ggcacgcaggacccgcagggactgcagcatctggtcgaagccattcaggccgtgcagtcc
gacttcgacaagatcttggtcatcacgcacctgagcgaactcaagcaggtgtttccggtg
cggatcgaggtcgaaaaagacccggtcgagggctcgcgcttcgaggtgatcggggtatag
DBGET
integrated database retrieval system
