Rhodothermus marinus SG0.5JP17-172: Rhom172_1316
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Entry
Rhom172_1316 CDS
T01606
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmg03032
]
Rhom172_1316
03400 DNA repair and recombination proteins [BR:
rmg03400
]
Rhom172_1316
Enzymes [BR:
rmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Rhom172_1316
DNA replication proteins [BR:
rmg03032
]
Prokaryotic type
DNA Topoisomerases
Rhom172_1316
DNA repair and recombination proteins [BR:
rmg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rhom172_1316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF3782
Motif
Other DBs
NCBI-ProteinID:
AEN73243
LinkDB
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Position
1513223..1515550
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AA seq
775 aa
AA seq
DB search
MPVVEVIPLHETTRERYLNFALSVITSRALPDIRDGLKPVQRRILYAMFQHLRLYPDARY
RKSATIVGEVMGKYHPHGDAAIYDAMVRMAQDFSLRYPLVDGHGNFGSIDGDAAAAMRYT
EARLRPLAMQLLEELRRQTVPMRPNFDGTLFEPVVLPARFPNLLVNGASGIAVGMATNIP
PHNLGEVIDALIYLIDVPNAPLETILERFIQGPDFPTGGRVLNTREELLEIYRTGEGPIE
LRGEYKLEGKTRIVITSIPYGIAKADLVEKIAEHIAAGKVPQLSDVRDESTDEVRIVLEL
RRGADPEAAMAYLFRHTPLQTRFHVNLTCLVPTANPEVAAPRKVDLMTMLRAFLEFRMEV
VVRRLRYDLEQLERRIHILRGFEKIFGALDEAIRIIRAARDKADAAQRLMHRFSIDDEQA
DAILETKLYKLSRLEIEAIRQELEEKERQAAELRALLADEAARWGLIREELKAIKKQFAD
ARRTVIAGPDEGFEYNQEAYIVDEDVYVIVTRDGWVKRQRSYTDVQSIRVREGDTVGWVL
PGSTRATVGFFTNYGRCYTTRIDSLPSTTGYGDPVQKLFDFSDRERVVGVVVFDERALPR
PVPEPEIEPALFENGEQEAPRVHVVAVTRKGQTLRIPIDGFREPSTKNGRLFMRLEKGDE
VLGVEVSAGDENVCLASREGYVLIFPVHQIPPVKSAAKGVIAMRLGRGDEVLGFTLASAA
REGLEVETSRGRREIVRTTKFEVSRRGNRGRQIIRRGQLVRVIPAPVEIRLNGQG
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgccggttgtagaagtcattcccctgcacgagacgacgcgggagcgttatctgaacttc
gcgttgtccgttattacaagccgcgcgttgcccgacatccgggacggcctcaagcccgtc
cagcggcgcattctgtatgcgatgtttcagcacctgcgtctctacccggacgcccgctat
cgcaaaagcgccacgatcgtcggcgaggtgatgggtaagtatcacccgcacggcgacgcg
gccatctacgacgccatggtacgcatggcgcaggacttctcgctgcgctatccgctggtg
gacgggcacggcaacttcggctcgatcgacggcgatgcggcggccgctatgcgctacacg
gaggcgcggctgcgtccgctggccatgcagctgctggaggagctgcgacgccagaccgtc
cccatgcggcccaacttcgacggcacgcttttcgaaccggtggtcctgccggcccgcttt
ccgaacctgctcgtcaacggcgccagcggtatcgcggtaggcatggcgaccaacatcccc
ccgcacaacctgggggaggtgatcgacgcgctcatctatctgatcgacgtgcccaacgcg
ccgctggaaaccatcctggagcggttcattcaggggccggactttccgaccggcggccgg
gtgctcaacacgcgcgaagagctgctggaaatctaccgcacgggcgaggggcccatcgaa
ctccgcggcgaatacaagctggagggcaagacgcgcatcgtcattacgtcgatcccctac
ggcatcgccaaggccgatctggtggaaaagatcgccgagcacatcgcggccggcaaggtg
ccccagctttcggacgtgcgggacgagtcgaccgacgaggtgcgcatcgtgctcgagctg
cgccggggcgccgacccggaggcggccatggcctacctgtttcgccacacgccgctccag
acgcgcttccacgtgaacctgacgtgcctggtaccgacggccaacccggaggtggccgcg
ccccgcaaggtcgatctgatgaccatgctccgggcttttctcgaattccgcatggaagtg
gtggtgcggcggctgcgctacgatctggagcaactcgagcgtcgcattcacatcctgcgc
ggattcgagaagatcttcggggcgctggacgaagccatccggatcatccgcgccgcacgc
gacaaggccgacgccgcccagcgcctgatgcatcgcttcagcattgatgacgagcaggcc
gacgccatcctggagacgaagctctacaagctctcgcggctggaaatcgaagcgattcgt
caggaactggaagaaaaagaacgtcaggcggccgagctgcgagccctgctggccgacgaa
gccgcccgctggggcctcattcgcgaggaattgaaagccatcaaaaaacagttcgccgac
gcgcggcgcaccgtcatcgccggacccgacgagggcttcgagtacaaccaggaagcctac
attgtggacgaggacgtgtacgtcatcgtcacgcgggacggctgggtcaagcgccagcgc
tcttacacggacgtgcagagcattcgcgtccgcgagggcgatacggtgggctgggtgctt
ccgggttcgacccgcgccaccgtcggctttttcacgaactacggccgttgctacaccacg
cgcatcgactcgctccccagcacgacggggtacggcgatccggtgcagaagctgttcgac
ttttcggaccgggagcgcgtcgtcggggtggtggtcttcgacgagcgggcgcttccccgg
ccggttccggagcccgaaatcgaaccggcgctgttcgaaaacggggagcaggaagcgccc
cgcgtgcatgtggtggccgtcacgcgcaaaggccagacgctccggattcccatcgacggc
ttccgggagccgtccacgaagaacggccgacttttcatgcgcctggaaaagggcgacgaa
gtgctgggcgtcgaggtgtcggccggcgacgagaacgtctgtctggcttcacgtgagggc
tacgtgctcatcttccccgtgcaccagatcccgccggtcaagtcggcggccaaaggcgtg
atcgccatgcggctgggcaggggcgacgaggtgctgggctttacgctggcttcggccgcc
cgggaagggctggaggtggaaaccagccggggccgacgcgagatcgtgcgcaccacgaag
ttcgaggtgtcgcgccggggcaaccggggccgacagatcatccggcgcggccagctcgtc
cgggtcatcccggcgccggtggaaattcgactgaacggacagggataa
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