Rhodothermus marinus SG0.5JP17-172: Rhom172_1357
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Entry
Rhom172_1357 CDS
T01606
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Pathway
rmg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rhom172_1357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmg03019
]
Rhom172_1357
03016 Transfer RNA biogenesis [BR:
rmg03016
]
Rhom172_1357
Enzymes [BR:
rmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Rhom172_1357
Messenger RNA biogenesis [BR:
rmg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Rhom172_1357
Transfer RNA biogenesis [BR:
rmg03016
]
Prokaryotic type
tRNA degradation factors
Rhom172_1357
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
S1_RRP5
KORA
Motif
Other DBs
NCBI-ProteinID:
AEN73284
LinkDB
All DBs
Position
1560928..1563246
Genome browser
AA seq
772 aa
AA seq
DB search
MMTQTTIHEIEFAPGKSLRLETGRLAKQANGAVVVRQGDTMVLCTAVLADEPREGQSFFP
LTVEYREKFAAGGRIPGGFIKREGRPTDKEILSSRLIDRAIRPLFPDGFFHEVQIICYVI
SADDRYDADVLAGTGASAALLLAGAPFDGPIAEVRVGRVDGQFVVNPTLKELEQSDINLV
VAGKEDAIVMVEGEMKEVSEEDMLEALEVAHEAIRKLCRGQLEFVAAHGRPEPFPYQTTT
LPEELVARVRELAVPKLEAHLRAPYDKQTFYEGLEQIGEETVAALLGTTDAEGNQVLAEA
TPEGWTADQIRKAVSQVTREVMRQMILREGRRIDGRSLDEIRPIWMEVGYLPRVHGSAIF
TRGETQVLASVTLGTSKDVQMIDQIFVQGDKRFFLHYEFPPFCTGEIRFLRGPGRREIGH
GYLAERALAAMLPDESSFPYTIRVNADVLESNGSSSMASVCAGSLALMDAGVPVKKHVAG
VAMGLIKEGDQVAILTDILGTEDHLGDMDFKVAGTRDGITACQMDIKIGGLTREIMQRAL
EQARRARMYILDLMEQTIEAPRPELSPYAPRLTQITIDPEFIGAVIGPGGRVVQGIQRET
NTTIEIEERDGVGVVTVAATNQENAQRAIEMIKQIVAVPEVGAEYEGIVRSIQSFGAIVE
IMPGKEGLLHISELDHGYVRDIHDYLKVGDKVRVKLIEIREDGKLRLSRKAFLPPPEPEA
KNGEPAREQASAERSGPPRDHASGRSHGPGHGRGGRSGRGRGPDRGRGGRRR
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgcagacaaccattcacgaaatcgaattcgccccggggaagtcactgcgcctg
gagacggggcgtctggccaagcaggccaacggcgctgtggtcgtccgccagggcgacacg
atggtgctctgcacggccgtgctggccgacgaaccccgcgaggggcagagctttttcccg
ctgacggtcgagtaccgcgagaaatttgccgccggtggccgaatcccgggcggcttcatc
aagcgtgagggacgtccgacggataaagaaatcctctcctcgcgcctgatcgaccgggcc
atccggccgctttttccggatggcttcttccacgaagtgcagatcatctgctacgtgatc
tcggccgacgatcggtacgacgccgacgtgctggccggtacgggcgcttcggccgcgctg
ctgctggctggcgcgcccttcgacggaccgatcgccgaggtgcgtgtgggacgcgtcgac
ggccagttcgtggtcaaccccacgctcaaggagctcgagcagagcgacatcaacctggtg
gtggccggcaaggaggacgccatcgtgatggtcgagggcgagatgaaggaagtcagcgag
gaggacatgcttgaggccctcgaggtggcgcatgaggccatccgcaagctctgccggggc
cagctcgaatttgtggcggcgcacggtcgtccggaacccttcccgtaccagacgaccacg
cttccggaggagctggtggcgcgcgtgcgcgaactggccgtgcccaagctggaagcgcac
ctgcgtgcaccctacgacaagcagaccttctacgaaggactggagcagatcggtgaggag
acggtcgcggccctgctgggcacgaccgacgcggaaggcaaccaggtgctggccgaggcc
acgcccgaagggtggacggccgaccagatccgcaaggcggtctcgcaggtgacccgcgag
gtcatgcgccagatgatcctgcgggaaggtcgccggatcgacggccgcagcctggacgag
atccggccgatctggatggaagtgggctatctgccccgcgtgcacggctcggccatcttc
acccgcggcgaaacgcaggtgctggcctccgtgacgctgggcacgtcgaaagacgtgcag
atgatcgaccagatcttcgtccagggcgacaagcggttcttcctgcactacgagtttccg
cccttttgcacgggcgagattcgcttcctgcgtggaccgggacggcgcgagatcggccac
ggctatctggccgagcgggcgctggccgccatgctgccggacgaatcgtcgttcccctac
acgatccgcgtgaacgccgatgtgctggagtcgaacggctcctcgtcgatggccagcgtg
tgcgccggctcgctggcgctcatggacgccggcgtgcccgtcaagaagcacgtggccggc
gtggccatgggcctgatcaaagaaggcgaccaggtggccatcctgaccgacatcctcggc
accgaagaccacctgggcgacatggacttcaaggtggccggcacgcgcgacggcatcacg
gcctgccagatggacatcaaaatcggtgggctgacgcgggagatcatgcagcgcgcgctg
gagcaggcccgtcgcgcccggatgtacatcctggatctgatggagcagaccatcgaagcg
ccgcgtccagagctttcgccatatgcgcctcgcctgacgcagatcacgatcgatccggag
ttcatcggcgccgtgatcggtccgggcggccgcgtggtgcagggcatccagcgcgaaacg
aacaccacgatcgagatcgaggaacgcgacggcgtgggcgtggtcaccgtggcggccacg
aatcaggagaacgcccagcgcgccatcgagatgatcaagcagatcgtggccgtgcccgag
gtgggcgccgagtacgagggcatcgtgcgcagcatccagagcttcggcgccatcgtggag
atcatgcccggcaaagaagggctgctccacatctcggaactggaccacggctacgtgagg
gacatccacgactacctgaaagtcggcgacaaagtccgcgtcaagttgatcgaaatccgc
gaggacggcaaactccgtctcagccgcaaggccttcctgccgccgccggagcccgaagcg
aaaaacggcgagccggcacgcgagcaggcgagcgctgagcggagcgggccgccgcgtgat
cacgcttccggacgctcccatggacccggacacggccgcggaggccggagcggacggggc
cgcggaccggatcgcggacgcggtggacgccgtcgctaa
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