Rhodothermus marinus SG0.5JP17-172: Rhom172_1612
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Entry
Rhom172_1612 CDS
T01606
Name
(GenBank) protein of unknown function DUF490
KO
K09800
translocation and assembly module TamB
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rmg02000
]
Rhom172_1612
Transporters [BR:
rmg02000
]
Other transporters
Pores ion channels [TC:
1
]
Rhom172_1612
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF748
YhdP
DUF481
Motif
Other DBs
NCBI-ProteinID:
AEN73529
LinkDB
All DBs
Position
1831668..1836245
Genome browser
AA seq
1525 aa
AA seq
DB search
MPVRALGHITRRLLILAAGVLAVGLVLFVALTRTRAGRDFVRAQLEAAFRAHLGGQLQIE
RLDGDLVRGLYATRVRLFAPDGRLLLDVDSVALRPAWRMLLSRTLAFRRVELFRPRLFLH
YENGRWNFAQWRDTSAAPSDARWSLAITDLHLHNGSVETDRTGPPPEPVRRGQLFDFTQT
RLDSLTLQATLEYHPDRLLLDLLQLDAHLSHPDQRLRYLSGQLFYQEGRWLLPRLELALG
NTLLALSGQFIPRTPFAESALQLELETGTFDFAELRRLLPGLPLHRPVTMAGRLHGTING
LVLERLELASAAGHLRLEGTLLGLPDSLDFDLLATGTGLQTTGLVRLWPTLPLPASLQTP
TPLALRAEARGLMHLASGPTLRRLEGSVRLRGLPGTLEGPFRLVRKASGDAPAYEAHLRL
RNVQPARLWKDGPPSILLNGLAEMHGQGPRQFDLHLRLDPRPFGGGTNDSLLFTLQRSGS
RFWATFSLPQQDGSLTATAFYRSDPDSARFRVQAVARRFDLGPYLHPDTLQTHIDATFSL
EGAGTTWPELTATAHLQLDASYARRADRSWRLAPASVHLTLTPTDPLQHRLRITGDLLEA
ELHGHLTPDRLVPLVRYWQQAFAAAIHRQTEKPFYRPPRSFERPLPALRPQLAVLQGRLQ
VRRLDWLQPLAGLPSFRTDLTATLWTRAGADTLQLALEWQADSLRVGALHQEDVHGRLQL
ATGRQIDRSLVGLFEWQSARLQQLRQIRLVGYFLPEGAQLSLSSRPDTTGETLRLTATLD
LLDRFNRLTLQEFYWQVRDYRWQLTQPAHIDLYADAAVLHSLLLRNRPAADTVAGEIELK
GMLSAQVTDTAYVTLRSIALEELTRALGRARRLSGQLEGRLSLVGAFGTPQLAGFLHVDR
LHYDRHPLGTLRLVSHYVPGSPQIALDARLDPDTTIDAANRLHLFGTVRLPSSDDAGQLD
LRLETTHADAFFFTYIFPDLIANVQGYFAGRGRITGTFRRPIFNAAMQLHAGAFDIPRFN
LHYRIEGPVSVDEAGFLLEAVRLQDPTGGQARVDGRIFFNEYRFFSFDLTARLDGLQVMN
VTYSRDLPFYGKIWGRGTLSLGGPLYGALLQTADAEVLPKSEIYIPLAESGTEADEAFII
FADSTGRIPERPTRRPNLLARRPPGERSFLDGLDLDLNLLAPQGTTVRLVIDPLLGDVIN
ARGSGRLQIIRQEGTFQAFGQLDVTEGDYLFTAGEIFVRRFLIEGGTITWDGDPINARLD
LQAAYRTRASRAGLPGTLGQGTGLIPLVVQMHITGRVEAPQVSLRLAIDRSINEPLAGYE
GLEALLNQPERAAEYATSVLLTNSFLLTTERTTPETLTSSGNQLAFNSLSQLIASQLNRY
LSQVLPNVDLLLGVQGEGTQRLDVTYGIALRLLNERLIIRGQGVYRGESTAEGQQNLLGE
FVVEIRLTPSVSVQVFYRREDDVLNDYTLTSVTGAGLSYQTDFPTWRRLLDRLFGWLIPD
RTPPETPPLTRAGNNSEQADVEQHR
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgtacgtgcgctcggacatattacccgccgcttgttgatactggcggccggcgtg
ctggccgtcgggttggtgctttttgtggcgctgacacgcacgcgcgccggacgcgacttc
gtgcgcgcgcaactggaagcggccttccgagcgcatctgggcggccagcttcagatcgag
cgtctggacggcgatctggtgcgcggcctgtacgctacgcgcgtccgcctctttgcgccg
gacggtcggttattgctggacgtcgattcggtagcgctgcgccctgcctggcggatgctc
ctcagccgtacgctggcctttcggcgcgtggaactgttccgccccaggcttttcctgcac
tacgagaacggccgatggaattttgcgcaatggcgcgacacgagcgctgcgccttccgat
gcccgctggagcctggcgattaccgaccttcatctgcacaacgggagcgtcgagacagac
cgcacgggcccgccgcctgagccggtacgccgagggcaactcttcgacttcacgcaaacc
cgcctggacagcctgacgctgcaggccacgctggaataccatccggaccggctgctgctc
gatctgctccagctcgacgcgcacctttctcatcccgaccagcgcctgcgttatctatcc
ggtcagcttttctaccaggagggccgatggctcctgccccggctggaactggcgctgggc
aacaccctgctggcgctcagcggccagttcatcccacgcacgccgtttgccgaatcggcc
ctgcagctcgaactggaaaccggcaccttcgactttgccgaactccgccgtctgctgccc
ggccttccactgcaccggcctgtcacaatggcgggtcggctgcacggcacgatcaacggc
cttgtgctggagcgcctggaactggcctccgctgccggccaccttcgtctggaaggcaca
ttgctggggctgcccgactccctggacttcgatctgcttgcgaccggtaccggcctgcaa
acgaccgggctggtccggctctggccgacgcttccgcttccagcctccctgcaaaccccc
accccgctggcccttcgcgcggaggcacgcggcctgatgcacctggcttctggcccgacg
cttcgccgtctggaagggagcgtgcgcctgcgtggcctgcccggaacgctggaaggaccg
ttccggctcgtacgaaaggcttccggagacgcaccggcctacgaggcccacctgcggctg
cgcaacgtgcagcctgcccggttgtggaaagatggtccgccgtccatcctgctcaacggc
ctcgccgaaatgcacggtcagggcccacgccagttcgacctgcatcttcgcctggatccc
cggccattcggcggtgggacgaacgactcgctgcttttcaccctgcagcggagcgggtcg
cgcttctgggccacgttttccctcccccagcaggacggtagcctgacggccaccgctttc
taccggtccgatcccgacagcgcccgtttccgggtgcaggccgtggcccgccggttcgat
ctgggaccctaccttcatcccgacacgctccagacccacatcgatgccaccttttcgctg
gaaggtgccgggacaacctggcccgagctgacggccaccgcccacctgcaactcgacgct
tcctatgcgcgacgcgccgatcgctcctggcggctcgcccctgcttcggtgcacctgacc
ctgacgccgaccgatccgttgcagcatcggctccggatcacgggggacctgctcgaagcg
gagctgcacggccacctgacccccgaccggcttgtaccgctcgtgcgctactggcaacag
gcgttcgccgcagcgatccatcgccagaccgaaaaacccttctaccggccgccgcgctcc
tttgaacgccccctgccggctctgcgcccacagcttgcagtccttcaggggcgcctgcag
gtgcgtcggctcgactggctgcagccgctggccggacttccgtcgtttcggaccgacctg
acggctacgctctggacacgggccggagccgacacgcttcagcttgcgctggaatggcag
gccgactcgctccgggtgggtgcgctgcaccaggaagacgtacacggccggctgcaactg
gccaccgggcgccagatcgaccgctcgctggtgggcctgttcgaatggcagagcgcccgg
ctacagcagctccggcagatccgtctggtaggctactttctgccggaaggggcccagctc
agcctgagcagccggcccgatacgaccggcgagacgctgcggctgaccgccacgctggac
ctgctggatcgcttcaatcgcctgacgctgcaggaattctactggcaggtccgggactat
cgctggcagctgacgcagccggcccacatcgacctgtatgccgatgccgccgtactccat
tcgctgctcctgcgcaatcggcccgccgccgacacggtcgccggcgaaatcgaactgaag
ggcatgctctccgctcaggtgaccgatacggcttacgtaacactacgcagcattgccctg
gaggaacttacccgggcactggggcgcgcccgcaggctcagcggacagctggaaggccgg
ctcagcctggtcggtgctttcggaaccccgcagctggccgggttcctgcacgtcgatcga
ctgcactacgaccggcatccgctggggacgttgcgcctggtcagccattacgtgccgggg
tctccgcagatcgcgctggatgcacgcctcgacccggataccaccatcgacgccgccaat
cggctgcacctgttcggcacggtccggcttccttcgtccgacgacgccggccagctcgac
ctgcggctggagaccacccatgccgacgcgttcttcttcacctacatcttccccgacctg
atcgccaacgtgcagggctactttgccggacgcggccgcatcacgggcacgttccggcgc
ccgatcttcaacgcggccatgcaactccatgccggcgccttcgacattccccgattcaac
ctgcactaccggatcgaaggaccggtgtcggtggacgaagcaggttttctgctggaagct
gtacgcctgcaggatccgaccggcggccaggcccgcgtcgacggccgcatcttcttcaac
gaataccgcttcttttccttcgacctgaccgcgcgtctggacgggctgcaggtcatgaac
gtcacctacagccgcgacctgccgttttacggcaaaatctggggacgggggacgctgtcg
ctcggcggcccgctctacggagcgctgctgcagacggccgatgccgaggtgctgccgaaa
agcgaaatctacattccactggccgaaagcggcaccgaagcggacgaagcgttcatcatc
tttgccgattcgaccgggcgcatcccggagcgtccgacgcgtcgccccaacctgctggcc
cggcgtccaccgggtgaacgatccttcctggatggactggatctggacctgaacctgctg
gcaccccagggcaccacggttcggctggtgatcgacccgctgctgggtgatgtgatcaac
gcgcggggtagcggccgccttcagatcatccgccaggaaggtacctttcaggccttcggg
caactggacgtgacggaaggcgactacctgttcacggccggcgagattttcgtccggcgg
tttctgatcgaaggcggcacgatcacctgggacggcgatcccatcaatgcccggctcgac
ctgcaagcagcctatcgcacgcgggcttcacgggccggccttccgggcacgctgggtcag
ggcaccggcctgattccgctcgtcgtgcagatgcacattaccggtcgcgtcgaggcccca
caggtcagcctgcgtctggccatcgaccgctccatcaacgagccgctggccggctacgaa
gggctcgaagcgctgctcaaccagcccgaacgagccgccgagtacgccacgagcgtgttg
ctcaccaactctttcttgctcactaccgaacgcaccacccccgaaacgctcacctcgtca
ggcaaccagcttgccttcaacagcctctcgcaactcatcgccagccagctcaaccgctac
ctgagccaggtgctgcccaacgtggacctgctgctgggcgtgcagggcgaggggacccag
cggctggacgtcacctacggcatcgcccttcgactgctgaacgagcgtctgatcatccgg
ggccagggcgtctaccgtggcgaaagcaccgccgagggccagcagaatctgctgggcgag
tttgttgttgagatccggctgacccccagcgtgtccgtgcaggtcttctaccggcgcgag
gacgacgtgctcaacgactacacgctgaccagcgtcacaggcgccggtctttcctatcag
accgacttccccacctggcggcgtttgctggatcggctcttcggctggctgattccggat
cgcacgcccccggaaacgccgccgctgacccgggccggcaacaactcggagcaggccgac
gttgaacagcatcgctaa
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