Rhodothermus marinus SG0.5JP17-172: Rhom172_1622
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Entry
Rhom172_1622 CDS
T01606
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rmg03009
]
Rhom172_1622
Enzymes [BR:
rmg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Rhom172_1622
Ribosome biogenesis [BR:
rmg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Rhom172_1622
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AEN73539
LinkDB
All DBs
Position
complement(1847638..1848402)
Genome browser
AA seq
254 aa
AA seq
DB search
MCVERNFGREDAMLEVAELPVLYLDNHLLVINKPSGLRSQGDRSGAPTVLSLGKALIKER
FNKPGNVYLGLVHRLDTPVSGVMVLARTSKAAARLGQQFRERTVEKVYLALVEGELAGSG
IWEDFMAPARDHMRLVPEDHPFGKRAVLHWQALMTRNGLTLMRLVPETGRKHQIRVQLAF
RGYPILGDRRYRARRWLAPGQMALHAWKLALTHPTRRERMQWTAPVPSFWDEAFRVRVDR
LLAYLEASGPEGIR
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtcgaacgaaacttcggaagggaagacgccatgctggaggtagcggaactccct
gtactgtacctggacaaccacctgctggtcatcaacaagccgtcgggattgcgcagtcag
ggcgatcggagcggggcgccgaccgtgctctcgctgggcaaggcactgatcaaggagcgc
ttcaataagcccggaaatgtctatctggggctggtgcatcggctggatacgccggtgtcg
ggcgtgatggtactggcccgtacgtccaaggcggccgctcggctgggacagcagtttcgg
gaacgtacggtggaaaaggtgtacctggcgttggtggaaggcgagctggcaggcagcggt
atctgggaggattttatggcgccggcccgcgaccacatgcgtctggtgccggaagaccat
ccgttcgggaaacgcgctgttctgcactggcaagcgctcatgacgcgcaacggcctgacg
ctcatgcgcctggtgcccgaaaccggccgcaagcaccagatccgggtgcaactggccttc
cggggctatcccatcctcggcgaccggcgctaccgggctcgtcgctggctggcgcccgga
cagatggcactgcacgcctggaagctggcgctcacgcatccgacccgccgcgagcgcatg
cagtggacggcacccgtaccgtcgttctgggacgaagccttccgggtgcgcgtcgatcga
ctgctggcctatctggaagcttccggtcccgaaggcatccggtaa
DBGET
integrated database retrieval system
