Rhodothermus marinus SG0.5JP17-172: Rhom172_2011
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Entry
Rhom172_2011 CDS
T01606
Name
(GenBank) (p)ppGpp synthetase I, SpoT/RelA
KO
K01139
GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:
2.7.6.5
3.1.7.2
]
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Pathway
rmg00230
Purine metabolism
rmg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Rhom172_2011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rmg03009
]
Rhom172_2011
Enzymes [BR:
rmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
Rhom172_2011
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
Rhom172_2011
Ribosome biogenesis [BR:
rmg03009
]
Prokaryotic type
Other maturation factors
Rhom172_2011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RelA_SpoT
HD_4
TGS
ACT_4
RelA_AH_RIS
HD
ACT
ACT_AHAS_ss
ThiS
SurA_N_2
Ub-Mut7C
Nfu_N
CaM_bind
Motif
Other DBs
NCBI-ProteinID:
AEN73914
LinkDB
All DBs
Position
complement(2307614..2309842)
Genome browser
AA seq
742 aa
AA seq
DB search
MVQVSTLLKEGDLNIPEEFQQRLEALIQACHRHLPRVDEELIRRAFRVSYWAHRDHRRVT
GEPYILHPLEVAFIVAEDISFDDVSVAAALLHDVVEDSDISLDFIREEFGETMGIIIDGL
TKIQGVFTSRELGQAENVRKLMLSMAEDIRVILVKFADRLHNMRTIEALPPQKRLKIATE
TLELFAPLAHRFGLFKIKSELEDLSLKVLQPDEYYAIVRGLNESKKEREAYIQRFIEPLK
QRLEEAGLEFDLYGRPKNIYSIYRKMKRQNKPLEEIYDLFAIRIVLKSSGRKGKEDCWRA
YSIVTDLYKPLPERFRDFISVPKSNGYQSLHTTVLGPEGRKVEVQIRTQEMHEVAERGVA
AHWRYKEGIEEPDPKMDQWLRWVREILENPKPDQATEFVKEFRLNLYDDEIYVFTPKGDV
ISLPQGATPVDFAFRVHTEVGLHCIGAKVNGKLVPLSYKLKSGDQVEIITSKKQTPNPDW
MKFVVTQKARSHIRHWINEQRRKTIELGKELWEKRAQRLGLEVDERQLQRVAHRLKFPNL
QQMFYEIGSGLFEVDELVRALRAGDGQQQESQSQALRLKYESFLDTAKETGQPALKIDGE
LHTDIVTTYASCCNPIPGDEVFGYVSRSGAIKIHRVNCKNAPYLLINHPDRIVPVEWSRQ
KDVQFLAALRVIGEDRVGIVSDITTVISKSLKTNIRSITVDSEDGVFEGTIVLYVSDLEH
LRRVIERIKRIDGIYGVYRFEE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggtccaggtatcgaccctcctgaaagaaggggatctgaacatcccggaagaattccag
cagcgtctggaagcgctgattcaggcctgccacaggcacctgccgcgcgtcgacgaagag
ctgattcgccgggcgtttcgggtgagctactgggcccaccgggaccaccggcgggtgacg
ggcgagccctacatcctgcatccgctggaagtggccttcatcgtggccgaggatattagc
ttcgacgacgtgagcgtggcggccgcgctgctgcacgacgtggtcgaagactccgacatc
tcgctggacttcatccgggaagagttcggcgagaccatgggcatcatcatcgacgggctg
accaagatccagggcgtcttcacctcgcgcgagctgggacaggccgagaacgtgcgcaag
ctcatgctctcgatggccgaggacatccgggtcatcctggtcaaattcgccgaccggctg
cacaacatgcggacgatcgaagcgctgcccccgcagaagcgcctgaagatcgccaccgaa
acgctggagctgtttgccccactggcccaccgcttcggtctgttcaagatcaaaagcgaa
ctggaggacctttcgctcaaggtactgcagcccgacgagtactacgccatcgtgcgcggg
ctcaacgaatccaaaaaggagcgggaggcctacatccagcgcttcatcgaaccgctgaag
cagcgactggaggaggccggactggagtttgacctctacggccggcccaaaaacatctac
tcgatctatcgcaagatgaagcggcagaacaagccgctggaggagatctacgacctgttt
gccattcggatcgtgctcaaaagttcgggccgcaagggcaaagaggactgctggcgggcc
tattccatcgtgacggatctgtacaagccgctgccggagcgtttccgggatttcatctcg
gtgcccaagtccaacggctaccagagtctgcacacgacggtgctgggacctgaaggacgc
aaggtggaggtgcagatccgcacgcaggaaatgcacgaagtggccgagcgcggcgtggcc
gcccactggcgctacaaagagggcatcgaagagccggatccgaagatggaccagtggctc
cggtgggtccgcgagatcctggagaaccccaaaccggatcaggccaccgagttcgtcaag
gagttccggctgaatctctacgacgacgagatctacgtctttacgcccaaaggcgacgtg
atcagcctgccgcagggggctacgccggtagacttcgccttccgggtgcatacggaagtg
ggactgcactgcattggcgccaaggtcaacggcaagctggtgccgctgtcctacaagctc
aagagcggcgatcaggtggaaatcatcacctccaagaagcagacgcccaaccccgactgg
atgaagtttgtcgtcacccagaaggcacggagccatatccggcactggatcaacgagcag
cggcggaagacgatcgagctggggaaggagctctgggaaaaacgcgcgcagcggctgggc
ctcgaggtggacgaacggcaactccagcgggtggcacaccggctgaagttccccaacctg
cagcagatgttttacgagatcggcagcggcctgttcgaagtggacgaactggtcagggcg
ctgcgcgcaggcgacgggcagcaacaggaatcgcagtcccaggcgctgcggctgaagtac
gaaagcttcctggatacggccaaagaaacaggccagccggcgctgaagatcgacggcgag
ctgcacacggacatcgtgaccacttatgcgtcctgctgcaatcccatccccggcgacgag
gtcttcggatacgtgagccggagcggcgcgattaaaattcaccgggtcaattgcaagaac
gcaccctatctgctgatcaaccatccggaccgtatcgtgccggtcgagtggagccggcag
aaggacgtgcagtttctggccgcgctgcgcgtgatcggcgaagatcgggtgggcatcgtc
agcgacattaccacggtcatttccaagagcctcaaaacgaacattcgctccatcacggtc
gattcggaagacggcgtgttcgagggcaccatcgtgctttacgtgagcgatctggagcac
ctgcgacgggtcatcgagcgcatcaagcgaatcgacgggatctacggcgtctatcgtttc
gaggagtag
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