Rhodothermus marinus SG0.5JP17-172: Rhom172_2013
Help
Entry
Rhom172_2013 CDS
T01606
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Pathway
rmg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Rhom172_2013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmg03021
]
Rhom172_2013
03400 DNA repair and recombination proteins [BR:
rmg03400
]
Rhom172_2013
Enzymes [BR:
rmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Rhom172_2013
Transcription machinery [BR:
rmg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Rhom172_2013
DNA repair and recombination proteins [BR:
rmg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Rhom172_2013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AEN73916
LinkDB
All DBs
Position
complement(2310652..2311635)
Genome browser
AA seq
327 aa
AA seq
DB search
MSNYMVQLPEGVRVEEATETFGRFVVQPLERGYGVTIGNALRRVLLSSLPGVAITAVRID
GVQHEFSTIPGVTEDVAEIILNLKGVRFKAKDTTDANIRLSLKGPHVWTARDIAEATSHY
EVLNPDHYIATLAEGAEVNLELRMGRGRGYVPAEENKLPDDPIGVIAIDAIFTPIKNVRY
TIKPTRVGQKIEYERLELEITTDGSVSPEEALVQAATILRDHISLFITMESEPQPEVKKK
EVDAEVQRIRELLSQPVDELDLSVRAQNCLKAANIRTIGDLVRRQESEMLKFRNFGRKSL
QELIAVLEERGLHFGMDVDKYLEGAES
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacatggtgcaattgcccgaaggtgttcgggtggaagaggcgacggaaacg
ttcgggcgttttgtggtgcagccgctcgagcgcggctatggcgtgacgatcggcaacgcg
ctccggcgcgtgctgctttcttcgctgccgggcgttgccattacggccgtccgaatcgac
ggcgtgcagcacgaattctcgacaattccgggcgtcaccgaggacgtcgcggaaattatc
ctgaatctgaagggcgttcgcttcaaggcgaaggacaccaccgacgcgaacatccggctt
tcgctcaaaggaccgcacgtgtggacggcccgcgatattgccgaggccaccagtcactac
gaggtgctgaacccggaccactacatcgccacgctggccgaaggcgccgaggtgaacctc
gagctgcgcatggggcgcgggcgcggctacgtgccggccgaggaaaacaagctgccggat
gacccgatcggggtgatcgccatcgacgcgatcttcacgcccatcaagaacgtgcgctac
acgatcaaacccacgcgcgtgggccagaagatcgagtacgagcgcctggaactggaaatt
accacggacggctcggtctcgcccgaagaagcgctcgtgcaggcggccacgatcctgcgc
gatcacatcagcctcttcatcacgatggagagcgagccgcagcccgaggtcaagaagaaa
gaggtcgacgccgaggtgcagcgcatccgcgagctgctctcgcagccggtcgatgaactc
gacctgtcggtgcgggcgcagaactgcctcaaggcggccaacatccgcacgatcggcgat
ctggtgcggcggcaggagtccgaaatgctcaagttccgcaacttcggccgcaagtcgctc
caggagctgatcgccgtgctggaggagcgcgggctgcactttggcatggacgtcgacaag
taccttgagggagccgagagctga
DBGET
integrated database retrieval system
