Rhodothermus marinus SG0.5JP17-172: Rhom172_2178
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Entry
Rhom172_2178 CDS
T01606
Name
(GenBank) protein of unknown function DUF490
KO
K09800
translocation and assembly module TamB
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rmg02000
]
Rhom172_2178
Transporters [BR:
rmg02000
]
Other transporters
Pores ion channels [TC:
1
]
Rhom172_2178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF748
YhdP
Motif
Other DBs
NCBI-ProteinID:
AEN74079
LinkDB
All DBs
Position
complement(2473309..2478426)
Genome browser
AA seq
1705 aa
AA seq
DB search
MEPTPSISPARRWLRRIGWALLLVIGTPIVLVGLLLLVLQTSWGAEQVRRLIERQVNAQL
QGGRLEIGALRGNFVRTLALYDVALRDTSGRALLALDSLEVAYVPEALLFDRRVHLRRVR
LIRPRLELTQQPDSTWDLLRLFATVPDTTAKEAEAGAAPDIWIDHLALRNGAAALHFYAS
RADSTWHLHRLDVQLDTLRLPPEGWPAFSVRTLEAVLQPPDAPDSVHVLTRLALRARRFR
LDTLRVWSARSRVAGGGTLLLPADTGQIEAVQFRLEARPLALYDLTPFVAVPDPGRTLAG
FVTVQGSGRLLEAQAALRTGTGGELALAATFTPLLDDSVRYRAEVQVRRLDPAFFGGPTG
RLDLQFRADLQGPSLEALNGEARLDVSEARLGAYRLDPTRMAVRFVEGEGRWAAQTGLRG
AWLQLTGQGRPFGPTPTYRLDGLLQNLNPARFLADTSWTGQLNLAFRLEGEGTNRMDGRL
MLRPSRLNRATIEGGELAVHLRGDTLRFALEAGLAGGRLQGRGRLASASTPSYEVEPFVL
ERIDVAALLGDTLHSTVSGRLRLRGSGTTPEALRLEAALELDSLVYGTYRLAPVRVPVRM
DRGLLTATPEIGLGEGHVAFRLQGRPMARRPRWQIDRGRLERVNLAAVMPGWSSRLNGSF
EGFYRGATSADAEAELVLQLEDSRLNAQPLEAATLNATLRRGLLTLATRATWPDGSLQLE
AQADSLTTTPVYTIERLVFRGVDLAAWTGQQRPRTRLNGVLTLHGRGMEPRAMQLAARLR
LDASQVSDRPVSGQFRVAAVAGRWQLGGQMGVADGQARFDARLLLDGPTPRYALTLVAEQ
LDPMPLLGIDTLSARLSLDAELEGEGFDPATMQAHGRLQSDGAHLDALAVDRLDARFSMA
EGLLRLDTLRLESNVATAQGGGQVALVDPEGVRMSELTLQVQLHRLQPLRRLVGARLLAL
DGGRIEARAYGRPGQLRFEGSWTLQNLIYDELRLVELEGRTAGELDRQRHLSKAEIRSQV
HLLTLGTFQIEDARAELRYDGRQADYELRLDIDRRHTARLEGQVLPAEQEIRLTRLDMRL
HDARWRLLQPATFTYGEAYRIQGLLLYTEAQDQQLAADGVIDPDGMQSFVLTLERFRLET
VTDLFDLAGLGGALSGTVDLTGPAAAPRLGGQLLLDLTSEGRSVGDLQLNLQYDSLRLQV
DARLQHRADASTMTLRGTIPMDLRLQVPPDAPPFDPNQAPFDLTLAADTFAIAWIEPFLD
PEILRDVRGRLAGRVHIGGTLAAPRLEGQARLFDGAVYLPELGVTYRDIRAEAHMEGNRI
ILTAFELQSGGRLAGSGTVELEALTLGTLDLRMRARSFLAADNRAYRTVLSGTLRLTGTT
ERPEIEGDLQVVSADIYLIEQTTVADLEPVQLSEADLQMLRQYFGVRITEEDTTTFDFYE
ASRMRLNLRMERDVWLRSNANPKMNVQFTGTLTVQKEPYQDLQLFGTIEVIPERSYIVQF
GKRFEITEGTLSFNGPADDPELNLKARYVVPSREDQSSQVTILLSVSGRLDRLNLEFSSE
NPSGLELPDIISYIVFGRPAGQALASLAPGSNGAGGGLLGRGAGLALGQLAGVVEGLAGE
ELGLDVVEIEPDGLQGAKLTVGKYVSPRLFAAVSRPIAFGNNAATQRTEVYTEFTVEYTI
FDAMIVRVTSQGTTMRINLLWRYAY
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggaacccaccccgtccatatcccctgcgcgtcggtggctgcgccgcatcggatgggcg
ctgcttctggtgatcggcacgccgatcgtgctggtcgggctgcttctgctggtgctgcag
acgtcgtggggcgccgaacaggtgcgccggctgatcgagcgccaggtgaacgcccaattg
cagggcgggcggctggagatcggcgcgctgcggggtaacttcgtgcgcacgctggcgctc
tacgacgtcgccctgcgcgacacatccgggcgcgcgctgctggcactggattcgctcgaa
gtggcctacgtgcccgaggcgttgcttttcgaccggcgtgtacacctgcgacgggtgcgc
ctgatccgtccgcgcctggagctgacgcagcagcccgacagcacctgggacctgcttcgt
ctgttcgctaccgtgcccgacacgaccgcgaaggaagcggaggccggtgctgctccggat
atctggattgaccacctggcgctgcgcaacggagcggcggccctgcacttctatgcgtcc
cgtgccgattcgacctggcacctgcaccggctcgacgtgcagctcgacacgctgcgattg
ccaccggaaggctggcctgcgttctcggtacgcacgctggaagcggtgctgcagccgccc
gacgctcccgactcggtgcacgtcctcacccgactggcgctgcgcgcgcggcgcttccgg
ctcgacacgctgcgcgtatggtccgcccgtagccgggtggccggtggtgggacgttgctg
ctcccggccgacacggggcagatcgaagcggtgcaattccggctggaagcgcggccgctg
gccctctacgacctgaccccgttcgtggcggtcccggatccggggcggacgctcgcgggc
ttcgtgaccgtgcagggcagcggtcgcctgctggaggcgcaggccgcactgcgcaccggc
acaggtggcgaactggcgctggcggccaccttcacgccgctgctggacgattcggtgcgc
taccgggccgaagtacaggtgcggcggctggatccggctttcttcggcggaccgacgggc
cgcctcgatctgcaattccgggccgatctgcagggaccgtcgctggaggcgctgaacggc
gaggccagactcgacgtgtcggaagcgcgactgggcgcctaccgactggatcccacccgg
atggccgtgcgcttcgtggagggcgaaggccgatgggcggcacagaccggtctgcgcggc
gcctggctgcaactgaccggccaggggcgtccgttcggcccgacccccacctatcgcctg
gatggcctgctccagaacctgaacccggcccgcttcctggccgacacgagctggacggga
caactgaacctggcttttcggctggagggcgaagggacgaaccggatggatggacggctc
atgctccggccttcgcggctgaaccgggcgaccatcgaagggggagagctggccgtgcac
ctccggggcgacacgctccgctttgcgctggaggcggggctggccggtggtcgcctgcag
ggacgcgggcgattggccagcgcctcgacgccttcctacgaggtagagcccttcgtgctg
gagcggatcgacgtggcggccctgctgggcgatacgctgcacagcacggtcagcggccga
ctcaggctgcgcgggagcgggaccacgcccgaggcgcttcgcctggaggccgcgctcgaa
ctggacagcctggtctatggcacctaccgactggcacctgtgcgcgtgcccgtacggatg
gaccggggcctgcttacagccacgcccgaaatcggactgggcgagggccatgtggccttc
cgcctgcagggacgaccgatggctcgaaggccccgctggcagatcgaccgcggccgcctg
gagcgggtgaacctggccgccgtgatgccgggctggtcttcgcggctgaacggctcgttc
gaaggattttaccggggcgcgacgtcggccgatgcggaagccgagctggtgctgcaactg
gaggactcccggctcaacgcacagccactggaagcggccacgctgaacgccacgctgcgg
cgtgggctgctgacgctggcaacccgggccacctggcccgacggatcgctacagctggag
gcgcaggccgactcgctgacgaccacgccggtctacacgatcgagcggctggtctttcgc
ggcgtggatctggcggcctggaccgggcagcagcggccccgaacccggctgaacggcgtg
ctgacgctgcacggccggggcatggagccgcgcgcgatgcagctcgccgcaaggctgcgg
ctcgacgcctcgcaggtaagcgaccggcctgtttcgggacagttccgcgtggccgccgtg
gccggacgctggcagctcggcgggcagatgggcgtggccgacggacaggcccgcttcgac
gcccgactgctgctggatggacctacgccccgctacgcgctgacgcttgtggccgagcag
ctcgacccgatgcccctcctgggcatcgacacgctctcggcccggctctcgcttgacgcc
gagctggagggcgaaggctttgatccggccaccatgcaggctcacggccgcctgcagagc
gacggggcccacctcgacgcgctggccgtcgaccgactggacgcccgcttttcgatggcc
gaagggctgctgcgcctcgatacgctccggctggaaagcaacgtggcgacggcgcagggc
ggcggccaggtggcacttgtggatcccgaaggcgtgcgcatgtcggaactgacgctgcag
gtgcagctccatcggttgcagccgctgcgacgccttgtcggggcgcgcctgctggcgctc
gacggcggccggatcgaagcccgcgcttacggacggcccggtcagctccggttcgagggg
agctggacgctccagaacctgatctacgacgaactgcgtctggtggaactcgagggccgc
acggccggcgaactggaccggcagcgtcatctctcgaaggccgagatccggtcgcaggtg
catctgctgacgctgggcaccttccagatcgaagacgcccgggccgagctgcgctacgac
ggccggcaggccgactacgagctgcgcctcgatatcgatcgccggcatacggcccgcctc
gaaggccaggtgcttccggcggagcaggagatccggttgacgcggctcgacatgcggctg
cacgacgcccgctggcgtctgctgcagccggccacgttcacctacggcgaggcctatcgt
attcagggcctgctgctctacaccgaagcgcaggatcagcagctcgcggccgacggcgtg
atcgacccggacggcatgcagagcttcgtcctgacgctcgaacgcttccggctcgagacc
gttaccgacctgttcgacctggccggactgggcggtgcgctcagcggcacggtggacctg
accggtccggctgcggcgccgcggctcggcgggcagcttctgctcgatctgacctcggaa
gggcggtcggtgggcgatctacaactgaatttgcaatacgacagcctgcggctgcaggtg
gacgcccggctccagcaccgggccgatgccagcacgatgacgctgcgcggcacgattccg
atggacctccggctgcaggtgccgcccgatgcgccgccgttcgatccgaaccaggcaccg
ttcgatctgacgctggccgccgatacgttcgccatcgcctggatcgagccgtttctggat
cccgagatcctccgcgacgtgcgaggccgtctggccggacgtgttcatatcggcggcacg
ctggctgctccacggctcgagggccaggcccggcttttcgacggggccgtctatcttccc
gagctgggcgtcacctaccgcgacatccgggccgaagcccacatggaaggcaatcggatc
atcctgaccgccttcgaactgcaatcgggcggtcgcctcgccggcagcggcaccgtcgaa
ctcgaggcgctcacgctgggcacgctcgacctgcgcatgcgggcccgctcgttcctggcc
gccgacaaccgcgcctatcgcaccgtcctttccggaacgctccggctgaccggcacgacc
gaacggcccgaaatcgaaggcgacctgcaggtggtcagcgccgacatctacctgatcgag
cagaccacggtggccgacctggaaccagtccagctctccgaagccgacctgcagatgctg
cgtcagtatttcggcgtgcgcattaccgaagaggacacgaccaccttcgacttctatgaa
gcctcgcgcatgcgcctgaacctgcgcatggaacgcgacgtgtggctgcgctcgaatgcc
aaccccaagatgaacgtgcagttcacgggcacgctcaccgtccagaaggagccctatcag
gatctgcagctcttcgggacgatcgaggtgatcccggagcgcagctacatcgtgcagttc
ggcaaacggttcgagattacggaaggaacgctgtcgttcaacgggccggccgacgatccg
gaactcaacctgaaagcccgctacgtggtgccctcccgtgaggatcaatccagccaggtc
acgatcctgctctcggtcagcggacggctggaccggctcaacctggagttttcgtccgag
aacccttcgggtctcgaattgccggacatcatctcgtacattgtcttcggccgaccggcc
gggcaggcgctcgcctcgctggcgcccggtagcaacggagccggcggtggattgctgggc
cgcggagccggactggcgctcggccagctggccggcgtcgtcgaaggtctggccggcgaa
gaactcggactcgacgtggtcgagatcgaacccgatggcctgcagggcgccaagctgacc
gtcggcaagtacgtctcgccgcggctgtttgccgccgtcagccggccgatcgccttcggc
aacaatgcggccacgcaacgaaccgaagtctacacggagttcaccgtcgaatacacgatc
ttcgacgcgatgatcgtgcgcgtgaccagccagggaacgaccatgcggattaacctgctg
tggcgctatgcctactga
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integrated database retrieval system
