Rhodothermus marinus SG0.5JP17-172: Rhom172_2251
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Entry
Rhom172_2251 CDS
T01606
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Pathway
rmg00550
Peptidoglycan biosynthesis
rmg01100
Metabolic pathways
rmg01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rhom172_2251
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Rhom172_2251
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rmg01011
]
Rhom172_2251
Enzymes [BR:
rmg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Rhom172_2251
Peptidoglycan biosynthesis and degradation proteins [BR:
rmg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Rhom172_2251
SSDB
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Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AEN74148
LinkDB
All DBs
Position
complement(2569964..2571811)
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AA seq
615 aa
AA seq
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MIDYRVRARIFVGVIALLLGLLVLRLAQMQLWQTELYAGESRSNAVREQRVMPARGAIYD
RNGVLLVDNAPAYSLLITPRYFDPKNIPLLARLLEVPDSVVANRLAQARAWSAYRPSRVF
TDLPFETFSRVVENLYRLPGVQYEIDQRRRYHTPARAAHALGYVREITRAELEQLRDDGY
AMGDRIGKAGLEKFYEKALRGVPGRAFKLVNIHGQEIKPYRDGAEDVPPISGYDLHLGLD
YRVQALAESLFVGKRGAAVALDPNNGEIIALVSMPDFDPEVLSGPIDPDTWRYLTTSPEK
PLFNRATMSGVPPGSTWKPFMALVGLQEGVITARSTIYCPGGYLLGTRLFRCHGGAHGSL
DVREAIRLSCNTFFFTVMMRLDVNTLRRWANRFGFGVPAPMDIAEQNPGLIPDSAYYNRR
YPRGWTAGYTINLGIGQGDMTVTPMQLARYVAAIANGGTLYPPHLVRELVHPETGEVLRP
QLPPPEHIPIKPEYFQIVREGMRRVMEAGTGRWVQIPGIPSGGKTGTAQAPGGRKDHSLF
IMFAPYDAPKIAIAVLVENAGFGATVAAPIASLMAELYLTGEVATTPQRRYMLEHVLRQR
SQPLDEPTVTQAASR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgatcgactaccgggttcgggcgcggattttcgtcggagtcattgccctgttgctgggg
ctgctggtgctgcggctggcgcagatgcagctctggcagactgaactgtacgcgggcgag
tcgcgcagcaatgcggtgcgcgagcagcgtgtgatgccggctcgcggggccatctacgac
cgcaacggcgtgctgctggtggacaacgcgccggcctattcgctgctgatcaccccacgg
tatttcgatccgaaaaacatcccgctgctggcccggctgctcgaggtgcccgactcggtg
gtggccaatcggctggcgcaggcgcgggcctggagtgcctatcgtcccagccgggtcttt
acggacctgccgttcgagaccttcagccgcgtcgtcgaaaatctctaccgcctgcccgga
gtccagtacgagatcgaccagcgccgccgctatcacacgccggcccgtgcagctcatgcg
ctggggtacgtgcgggaaatcacgcgggccgagctggagcagctccgggacgatggctat
gcgatgggcgatcgcatcggcaaagccgggctcgaaaagttctacgagaaggctctgcgc
ggtgtgccgggacgggccttcaagctcgtcaacatccacggccaggagatcaaaccctat
cgcgacggggccgaagacgtgccgcccatcagcggctatgatctgcatctcgggctcgat
taccgcgtgcaggcgctggccgagtcgctcttcgtgggcaaacgcggagcagccgtggca
ctcgacccgaacaacggcgagatcatcgcgctggtgagcatgcccgacttcgatccggag
gtgctctccggaccgatcgatcccgacacctggcgctacctgaccaccagtcccgaaaag
ccgctgttcaaccgggccacgatgagcggggtgccgccgggttcgacctggaaaccgttc
atggccctggtggggctgcaggagggcgtcatcacggcacgcagcacgatctactgtccg
ggtggctatctgctgggcacccggcttttccgctgtcacggcggcgcgcacggatcgctc
gacgtgcgcgaggcgatccggctttcctgcaacacgttctttttcaccgtgatgatgcgt
ctcgacgtgaacacgctccgccgctgggccaaccgcttcggattcggcgtgccggcgccc
atggacatcgccgagcagaatccgggcctgattcccgactcggcctactacaaccggcgc
tatccacgcggctggacggccggttacacgatcaacctgggcatcggacagggcgacatg
accgtcacgcccatgcaactggcccgctacgtggcggccattgccaacgggggcacgctc
tatccgccccatctggtgcgcgagctggtccacccggaaaccggcgaagtgctcaggccc
cagttgcccccgcccgaacacattcccatcaagccagagtactttcaaatcgtgcgggaa
ggcatgcggcgcgtgatggaagcgggcactggccggtgggtacagattccgggcattccg
agcggcggcaagacgggcacggcgcaggcgcccggcggccgcaaggaccattcgcttttc
atcatgtttgcgccctacgatgcgccgaagatcgccattgccgtcctggtggaaaacgca
ggctttggcgcgacggtcgccgcgcccatcgccagcctgatggccgagctgtacctgacc
ggcgaggtggccaccacgccgcagcggcgctacatgctcgagcatgtactccgccagcgg
agccagccgctggatgaacccaccgtaacgcaggccgcttcccgataa
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