Rhodothermus marinus SG0.5JP17-172: Rhom172_2255
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Entry
Rhom172_2255 CDS
T01606
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Pathway
rmg00061
Fatty acid biosynthesis
rmg00071
Fatty acid degradation
rmg01100
Metabolic pathways
rmg01212
Fatty acid metabolism
rmg02024
Quorum sensing
rmg04146
Peroxisome
Module
rmg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rhom172_2255
00071 Fatty acid degradation
Rhom172_2255
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rhom172_2255
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rhom172_2255
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rmg01004
]
Rhom172_2255
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmg04147
]
Rhom172_2255
Enzymes [BR:
rmg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rhom172_2255
Lipid biosynthesis proteins [BR:
rmg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rhom172_2255
Exosome [BR:
rmg04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rhom172_2255
Exosomal proteins of breast cancer cells
Rhom172_2255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AEN74152
LinkDB
All DBs
Position
2577260..2579161
Genome browser
AA seq
633 aa
AA seq
DB search
MPAIVAFDTIPQLFNRLVAHYRGQRRPALSYKDRRTKTWVDITWEELEQHVHAMAGYLHK
RGVRSGDRVAILSENRPEWAITDLATQILGGVNVALYTSLPASQVGYIVRDSGARILVVS
SAVQLRKAETIFDECPELQEIVTLSEMRKDHPPYVRAWDDVLAEGAAYWAEHEAELSKLA
EQVQPDDLSALIYTSGTTGLPKGVMLTHRNFCANVQAALQRVDFGPADHHLSFLPLCHSF
ERTAGYTAVLACGARISYAESIEALSQNLLEVRPTVMISVPRLFERVYNAIHKSVEKSPS
LQQKIFHWAVGVGRRMAACRLEGRTPGPVLQLQHRLAHRLVFQKLHDRLGGNLRFAVSGG
AALPRHIGEFFLAIGLTIIEGYGLTETAPVLTVNPPDRPRFGTVGWVLPGVTIAIQRLTD
GKIVGQLSGDDYPSDLTTEEGEILVKGPNVMKGYWNNEEATREVFDADGWFHTGDVGRFD
QGYLVITDRIKHMIVSRGGKNIYPGPIEDQLKQEPWIDQIVVIGEGREFLTALIVPDFEA
LRQYAQEHNLQAASDEALLALPEIRALFEQSLRRYNRHAPAHERIRAFRLLSEPFTIENG
LLTPTLKPRRRQIEAHYADLIEAMYTEFGGDGD
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgccagccatcgttgccttcgacaccattcctcagcttttcaaccgcctggtggcgcac
taccgcggccagcgtcggccggcgctgagctacaaggaccggcgcacgaaaacctgggtg
gacatcacctgggaagagctggaacagcacgtgcacgcaatggccggctacctgcacaag
cggggcgttcggtccggcgatcgcgtggccattctttcggaaaaccgaccggaatgggcg
atcaccgacctggccacgcagatcctgggcggcgtcaatgtggcgctgtacacgtcgctt
ccggcctcccaggtgggctatatcgtcagggattcgggtgcgcgcatcctggtggtctcg
tcggccgtgcaactccgcaaggcggagacgatcttcgacgagtgtcccgagctgcaggag
atcgtcacgctgagcgaaatgcgcaaagaccatccgccctacgtgcgggcctgggacgac
gtgctggccgaaggcgccgcctactgggccgagcacgaggccgaactgtcgaagctggcc
gagcaggtgcagcccgacgacctgagcgcgctcatctataccagcggcaccaccggcctg
cccaagggcgtcatgctcacgcaccgcaacttctgcgcgaacgtgcaggcggcgctgcag
cgcgtggacttcggtcccgccgaccaccacctgtcgttcctgccgctgtgccattcgttc
gagcggacagccggctacacggccgtgctggcctgcggcgcccgcatctcctatgccgaa
agcatcgaggcgctgagccagaatctgctcgaagtgcggccgaccgtgatgatctcggtg
ccgcgcctgttcgagcgcgtctacaacgccatccacaagtccgtcgagaaaagtccgtcg
cttcagcagaagatctttcactgggccgtcggcgtcggccgacgcatggccgcctgtcgg
ctggagggacgcacgcccggaccggtactgcaactgcagcaccgactcgcccaccggctg
gtcttccagaaactgcacgatcggctgggcggcaatctgcgctttgccgtctcaggcggc
gccgccctgccccgacacatcggcgaattctttctggccatcggcctgacgatcatcgaa
ggctacggcctgaccgaaacggccccggtgctgaccgtcaacccgccggatcgcccgcgc
ttcggcaccgtcggctgggtgttgccgggcgtgacgatcgccatccagcgcctgaccgac
ggcaagatcgtgggccagctctccggcgacgactacccgagcgatctcaccaccgaagaa
ggggaaattctggtcaaaggcccgaacgtgatgaagggttactggaacaacgaggaggcc
acgcgcgaggtgttcgacgccgacggctggttccatacgggcgacgtgggccgcttcgat
cagggctacctggtcatcaccgaccgcatcaagcacatgatcgtctcccggggcggcaag
aacatctacccggggcccatcgaagaccagctcaaacaggaaccctggatcgaccagatc
gtggtgatcggcgagggacgggaatttctgacggcgctcatcgtgcccgacttcgaggcg
cttcgccagtacgcgcaggagcataacctgcaggctgcgtccgacgaagcgctgctggcg
cttcccgagatccgggcgcttttcgagcagagcctgcgccgctacaaccgacatgcgccg
gcccacgaacgcatccgggccttccggctgctcagcgaaccgttcaccatcgaaaacggc
ctgctcacgcccacgctgaaaccgcgtcgccgccagatcgaagcgcactatgcggacctg
attgaggcgatgtacactgaatttggcggcgacggcgattaa
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