KEGG   Rhodothermus marinus SG0.5JP17-172: Rhom172_2551
Entry
Rhom172_2551      CDS       T01606                                 
Name
(GenBank) ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
rmg  Rhodothermus marinus SG0.5JP17-172
Pathway
rmg00230  Purine metabolism
rmg00240  Pyrimidine metabolism
rmg01100  Metabolic pathways
rmg01232  Nucleotide metabolism
Module
rmg_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
rmg_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:rmg00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Rhom172_2551
   00240 Pyrimidine metabolism
    Rhom172_2551
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rmg03400]
    Rhom172_2551
Enzymes [BR:rmg01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Rhom172_2551
DNA repair and recombination proteins [BR:rmg03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Rhom172_2551
SSDB
Motif
Pfam: Ribonuc_red_lgC LAGLIDADG_3 Intein_splicing Ribonuc_red_2_N TSCPD LAGLIDADG_WhiA LAGLIDADG_2 RUBY_RBDX
Other DBs
NCBI-ProteinID: AEN74440
LinkDB
Position
complement(2914489..2919855)
AA seq 1788 aa
MAKSPRKSSADTPELRRGLRIERVFSQEGVHPFDTVTWERRTAAIYNSKGEAVFEQKDVE
FPSTWSQLATNVVASKYFYGDLAAGNGDPREGKREYSLKQLIHRVTRTIADWGKAQGYFA
TPEDAERFYDELTWLCLHQYGAFNSPVWFNVGLYHQYGVRDTGGKTIYGWDFEKQRVVPV
DPYERPQASACFIISVEDSIDDIWQLMAESARLFKFGSGVGADWSKLRSTKEKLSGGGRP
SGPVSFMRVQDATGATIKSGGKTRRAAIMQTLKVWHPDIMEFVTAKAKEEKKAWALIEQG
YDGSFNGEAYSSVAFQNVNQSVRVTDEFMEAVLARRKFPLKAVTTGEVIEEIDAYELLYK
VAEGTWICGDPGLQYEDTIQRWHTCKNSGPINSSNPCVTGDTLVATEEGLRRIDSLVGET
PRVVGLDGRLHRTTRVIETGVKPVYRLRTRCGYEVKLTADHPVWTENRGDVPAAELTRND
IVRLVPPRFGREHLDPEVAEYIGLMVGDGCISHEVATLMLDRREKAVAEKVAHVVNQFDR
KTHLGGVRVAERPTGVAVATGARAVQEVLKRFAMLDEGSSAKRFTEEVFRLDRQSVAALL
RGLFTADGTVANYGRKSQYISLESTSRELLKQVQLLLLGFGIKSKLYENRRLTDRALLPD
GRGGIKEYRVQPLYSLRISRSSRVRFEREIGFLPESPKAAALRALNATVSAYEDPLVDQV
VSLELLGEEPVYDLTEPVTDHFVANGIAVHNCSEYMFLDNSACNLASLNLRKFQREDGSF
DVERFRAAVRIFITAMEILVDNAGYPSEKIAQNSHDYRPLGLGFANLGAMLMAMGLPYDS
DEGRAVAGAITAIMHAEAYARSAEIAAIERIGPFPGFEKNREPMLEVMRLHQAAVEDIHP
SCPAYLKEAARESMARMVALGERYGYRNAQATVLAPTGCLVGDSLIATDRGLVRLQTLGN
PEGPQWQDVSFRVFTDEGQKLATRFYVNGIEATRKIRTRAGYTIQGTLQHRIKVVDPDTG
QWVWKRFSDIRPGDIVPLAMNTIIGQPRTVTLPPLGELHWNADRNVRVPRTVTPELAELV
GYFMGDGSLHAKGLRFCVDARDQDVVAHLQRLIYRLFGLQAYTEQRQGYVEVGVHSVPLV
LWWEACGFAKRLPSDAHQGKGYQPYIPDALLYTNDPAVYRAFLRGLFEADGTVIAGVPAL
STASESLAQEVRTLLLALGYPTQTKVEEDRRSARGRKFLQVLRLKNRGYNARFLQEIGFI
GGRKRQAVAEATTRSSAKRDRIYLEPALVEELVPAGSSHRDAVMLSLRRYGAIPRQRVEQ
LYEETGDERLVQYMSYFYDVVEANEDGGEQLTYDLSVPENVTYTANGFISHNTISFMMDC
DTTGIEPDIALVKYKLLAGKGDGMFKIVNNTVPIALRRLGYSEGQIKDILAYIEENDTIE
GAPHLKEEHLPVFDCAFKPYKGQRFIHYMGHIKMMAACQPFISGAISKTVNMPEHVTVEE
IMDAYIQGWKLGLKALAIYRENSKRSQPLSTRKEDKKGETSGDGMATGEPKVIEKVVEKI
VYKPVRKRLPDERPSITHKFSVAGHEGYLHIGLYPDTGMPGEIFITMAKQGSTISGLMDA
FATAISIALQYGVPLEDLCNKFSHMRFEPAGFTNNPQIPIAKSIMDYIFRYLSLKFLGRP
QEEKQENPRDGVAAEVKRSGPARDERQLELSFEPQPTGKVTPLVGQTIETFLQTQQKSAA
AAPEAAAVPTVSFQNQEDAPACSNCGSITVRSGACYVCPNCGSSSGCG
NT seq 5367 nt   +upstreamnt  +downstreamnt
atggcaaagtccccccgcaagtcgtcggcagacaccccggagctccgtcgcggcctgcgc
atcgagcgtgtattttcgcaggaaggcgttcatccgttcgacacggtcacctgggagcgc
cgaacggccgccatctataacagcaaaggcgaagcggtcttcgagcagaaggatgtcgaa
tttccctcgacgtggagccagctcgccacgaacgtggtcgcgtccaagtacttctacggc
gatctggcggccggcaacggcgatccccgcgagggcaagcgggagtacagcctgaagcag
ctcatccaccgggtgacgcgcacgatcgccgactggggcaaggcccagggctatttcgcc
acaccggaagacgccgagcgcttctacgatgagctgacctggctctgcctgcaccagtat
ggcgctttcaactcgccggtctggttcaacgtgggcctctaccaccagtacggcgtgcgc
gacacgggcggcaaaacgatctacggctgggatttcgaaaagcagcgggtggtgcccgtc
gatccctacgagcggccccaggcctcggcctgcttcatcatttcggtagaggactcgatc
gacgacatctggcagctcatggccgaaagtgcccgcctgttcaagttcggttcgggcgtg
ggcgccgactggtccaagctgcgctcgacgaaggagaagctttcgggcggtggccggcct
tcgggtccggtttcgttcatgcgcgtgcaggacgccacgggcgccacgatcaagtcgggg
gggaagacgcgccgggccgccatcatgcagacgctgaaggtctggcaccccgacatcatg
gagttcgtcacggccaaggcgaaggaggaaaagaaggcctgggccctgatcgagcagggc
tacgacggctcgttcaacggtgaggcctacagttcggtcgccttccagaacgtgaaccag
tccgtgcgcgtcacggacgaattcatggaggccgtgctggcccgcaggaaattcccgctc
aaggccgtgacgacgggcgaagtcatcgaagaaatcgacgcctacgagctgctctacaag
gtggccgagggcacctggatctgcggcgatccgggcctgcagtacgaagacaccatccag
cgctggcacacctgcaaaaacagcgggccgatcaactccagcaatccgtgtgtgacgggc
gatacgctggtggccaccgaggagggattgcggcgcatcgacagtctggtgggcgaaacg
ccgcgggtggttggactggacgggcgtctgcatcggaccacccgggtgatcgagacgggc
gtcaagccggtctaccgactgcgcacccgttgcggttatgaggtgaagctgacggccgat
cacccggtgtggacggaaaaccggggcgatgtaccggccgccgaactgacccgcaacgac
atcgtgcgcctggtgccgccgcgcttcggtcgggagcatctggatcccgaggtagccgag
tacatcggtctgatggtcggggacggctgcatttcgcatgaagtggccaccttgatgttg
gatcggcgggaaaaggctgtggccgaaaaagtcgctcatgttgtcaatcagttcgatcga
aagacccatctcggaggtgttcgggtggcagagcggcctaccggagttgccgttgctact
ggtgctcgggccgtacaggaggttttgaaacggtttgctatgctggacgagggctcgtca
gcaaaacgatttaccgaggaagtctttcggctggatcgacagagtgtggcagcgctgctg
cgtgggctgtttacggccgatggcacggtagccaactatggtagaaagagccagtacatc
agcctggaatcgacttcgcgcgaactcctgaagcaagttcagctgcttctgctgggcttt
ggtatcaagagcaagctgtatgaaaaccggcgtttgaccgatcgtgcattgctgccggat
ggcagaggtgggataaaggaataccgggtccagcctctgtacagtctacgcattagccgg
tcgagtcgggtccgctttgagcgagagatcggctttctgccggagagtccgaaggcggct
gctctgcgtgcgctgaatgctaccgtgtcggcgtacgaagatccgctggtcgatcaagtt
gtttcgcttgaactgctgggtgaggaacccgtctacgatctgacggagccggttacggat
cactttgtggctaacggcatcgccgtccataactgctccgaatacatgttcctcgacaac
tcggcctgcaatctggcctcgctgaacctgcgcaagttccagcgggaggacgggtcgttc
gacgtcgagcgtttccgggcggccgtgcgcatcttcatcacggccatggagatccttgtc
gataacgccggctatccgtcggaaaagatcgctcagaacagccacgattaccggccgctg
ggactgggctttgccaacctgggggccatgctcatggccatgggactgccttacgacagc
gacgaagggcgggccgtggccggcgccatcacggcgatcatgcatgcggaggcctatgcc
cggagcgccgagatcgcggccatcgagcgcatcgggccgttcccgggcttcgaaaagaac
cgggagcccatgcttgaggtgatgcgcctgcaccaggcggccgtcgaggacattcacccg
agctgtccggcctacctgaaggaagccgcccgcgaaagcatggcgcgcatggtggcgctg
ggcgaacgctacggctaccgcaacgcccaggccacggtactcgcgcccaccggatgcctt
gtgggggactcgttgattgccacagaccgcgggcttgtgcgcctgcagaccctggggaat
ccggagggaccgcagtggcaggacgtgtcgttccgggtcttcacagacgaaggccagaaa
ctggctaccaggttttatgtgaacggcattgaagcgacccgcaaaattcgcacgcgggcc
ggctataccattcaggggacgctgcaacatcgtatcaaggtggtggaccccgacaccggc
cagtgggtgtggaaacggttcagcgacattcggccgggagacattgtgccgctggctatg
aatacaattatcggccagccacggacggtcaccttaccaccgctgggcgagctgcactgg
aatgccgaccggaatgtgcgcgtcccgcggaccgtcacgccagagctggccgagctggtg
ggatactttatgggagatggcagcctgcatgccaaaggattgcggttctgtgtggatgcg
cgggatcaggacgtggtggcgcatctgcagcggttgatctaccgactgttcggactgcag
gcttacaccgagcagcggcagggctacgtggaggtcggcgtgcattccgtgccgctggtt
ctctggtgggaggcctgtgggtttgccaagcggttgccgtcggatgcgcaccaggggaaa
ggctatcagccttatatcccggacgcccttctttacaccaacgatccggccgtttatcgg
gcatttctgcgcgggctgttcgaggcggacggcacggtgatcgccggtgtgccggcgctt
tccactgcttcggaatcgctggcgcaggaagtccgcacgctgctgctggcgctcggctac
ccgacccagaccaaggtggaagaagatcgacggtcggcccgtggccggaaattcctgcag
gtgcttcgtctgaaaaaccgtggctacaacgcccgcttcctccaggagatcggctttatc
ggcgggcgcaaacgccaggcggtcgccgaggccactacacgcagcagcgccaagcgggat
cgcatttatctggagccggccctggtggaagaactggtgccggctggcagttcgcatcgc
gacgcggtaatgctttcgctgcgtcgctacggcgccattccgcggcagcgtgtcgagcag
ctctacgaagagaccggcgacgagcggctcgtccagtacatgagctacttctacgatgtc
gtcgaggccaacgaggatggcggcgagcagctgacctacgacctctcggtgcccgaaaac
gtcacttacacggccaacggctttatcagccataacaccatctcgtttatgatggattgc
gatacgacgggcattgagccggacatcgcgctggtcaaatacaagctgctggcaggcaag
ggcgatggcatgttcaagatcgtcaacaacacggtgcccatcgccctgcgccgcctgggc
tacagcgaggggcagatcaaggacatcctggcctacatcgaagaaaacgacacgatcgaa
ggcgcgccgcacctgaaagaagaacacctgccggtcttcgactgcgccttcaagccctac
aagggccagcgcttcatccactacatgggccacatcaagatgatggccgcctgccagccc
ttcatcagcggtgccatctccaagaccgtcaacatgcccgagcacgtgacggtcgaggag
atcatggacgcctacatccagggctggaagctcgggctcaaggcgctggccatctatcgt
gagaactccaagcggagccagccgctctcgacgcgcaaagaagacaagaagggcgagacg
agcggcgacggcatggcgactggcgagccgaaggtcatcgaaaaggtcgtcgagaagatc
gtctacaagccggtgcgtaagcggctgcccgacgagcggccttcgatcacgcacaagttc
tcggtggccggccacgaagggtacctgcacatcggcctgtacccggacaccggcatgccg
ggcgagatctttatcacgatggctaagcagggctcgacgatctcgggattgatggacgcc
ttcgcgacggccatttcgattgcgctccagtacggcgtgccgctcgaagacctgtgcaac
aagttcagtcacatgcgcttcgagccggccggcttcacgaacaacccgcagattccgatc
gccaagtccatcatggactatatcttccgctacctgtcgctcaaattcctgggacggccg
caggaagaaaagcaggaaaatccacgcgacggggtggcggccgaggtgaagcgaagcggt
ccggcccgtgatgagcgacaactggagctgagcttcgagccgcagccgaccggcaaggtg
acgccgctggtgggccagacgatcgaaaccttcctgcagacgcagcagaagagcgcggcc
gccgcgccggaagccgctgcggtgccgacggtgtcgttccagaaccaggaagacgcgccg
gcctgctcgaactgcggttcgatcaccgtgcgctcgggcgcctgctacgtgtgcccgaac
tgcggtagctcgagcggttgcggctga

DBGET integrated database retrieval system