Rhodothermus marinus SG0.5JP17-172: Rhom172_2568
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Entry
Rhom172_2568 CDS
T01606
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rmg03009
]
Rhom172_2568
Enzymes [BR:
rmg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Rhom172_2568
Ribosome biogenesis [BR:
rmg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Rhom172_2568
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Methyltransf_15
MTS
N6_N4_Mtase
TRM5-TYW2_MTfase
PrmA
Methyltransf_37
Methyltransf_ANTKMT
Methyltransf_11
Cons_hypoth95
PCMT
Methyltransf_12
Methyltransf_4
UPF0020
TPMT
DOT1
RrnaAD
PabTrmU54_TRAM_dom
Motif
Other DBs
NCBI-ProteinID:
AEN74457
LinkDB
All DBs
Position
2937853..2939253
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AA seq
466 aa
AA seq
DB search
MLKKGAELELIVEKFADRGKSLTRVDGYVLFVEGGVPGDRARVRIVKRKKNYAEGRIVEL
LEPSPLRTEPRCRYFGTCGGCKWQHVRYEAQLEAKRQSVYEALVHHGGFEDVEVRPTLPS
PRLYGYRNKMEFSFSADRWLTPDEIASGRPLDRHFAVGLHVPGNFYKVIDLEECHLPEPI
TVRLLNELRAFFKAKGWEPWDIRRHEGYLRHLVIRTGTRTGEVMVNLVTSRYDEARMAEL
GAFLQEQFPEVTTLVNTINTRPAQVSYGEATYTIFGPGVIHDCIGPFRFEIAPDAFFQTN
TEQAERLYAVTRELAALRPDDLVYDLYCGTGTISIFIAPQVRHVIGVELVESAVENARAN
AAANHITNCTFVAGDLLEVLTPTFIQAHGRPNVVIVDPPRGGMHPSVVRRIGQLRPERFV
YVSCNPQTQARDLKLLRDLYRIEAVQPVDLFPHTDHVESVVALRAR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaagaaaggcgccgagctggaactgatcgtcgaaaagtttgccgaccgcggcaag
tcgctcacccgcgtggacggctacgtgctgttcgtcgaaggcggcgtgcccggcgaccgg
gcgcgcgtgcgcatcgtcaagcgcaagaaaaactacgccgagggccgcatcgtcgagctg
ctcgaaccgagcccgctccgcaccgagccgcgctgtcgttacttcggcacctgcggcggc
tgcaagtggcagcacgtacgctacgaagcccagctcgaagccaagcgccagagcgtctat
gaggcgctcgttcaccacggcggcttcgaagacgtcgaggtgcgtcccacccttccctcg
ccccggctctacggctaccgcaacaagatggagttttccttcagcgccgaccgctggctg
acgcccgacgaaatcgccagcggccgaccgctcgaccgccattttgccgtgggactccac
gtgccgggcaacttctacaaggtgatcgatctggaggaatgccacctgcccgagccgatc
accgtgcggctgctcaacgaactgcgggccttcttcaaggcgaagggctgggagccgtgg
gacatccggcggcacgaaggctacctgcgccatctggtgatccgcacgggcacgcgcacc
ggcgaggtcatggtcaacctggtcaccagccgctacgacgaagcccgcatggccgagctg
ggcgccttcctgcaggagcagtttccggaagtcaccacgctggtcaacaccatcaataca
cgtccggcgcaggtatcctacggcgaggccacttatacaattttcggtcccggcgtcatt
cacgactgcatcggaccgtttcggtttgagattgcaccagacgctttttttcaaacgaac
accgagcaggccgagcggctctacgcagtaacccgcgagctggccgcgctgcgtccggat
gatctggtatatgatctgtactgcggcaccgggacgatctctatctttattgccccgcag
gtgcgacatgtcatcggcgtggaactggttgaatcagccgttgaaaatgcccgagctaac
gctgctgccaaccacatcacaaactgcacgtttgtggccggcgatctgctggaagtgctc
accccgaccttcatacaggcgcatggtcgtcccaacgtggtgattgtggaccctccacga
gggggcatgcatcccagcgtggtgcgccgcatcggccagctccgaccggagcgattcgtc
tacgtgagctgcaatccccagacccaggcgcgcgacctgaagctgctccgcgacctgtac
cggatcgaggccgtgcagcccgtcgatctgtttccgcacaccgaccacgtggagagcgtc
gttgccctgcgggcccgttaa
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