Rhodothermus marinus SG0.5JP17-172: Rhom172_2622
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Entry
Rhom172_2622 CDS
T01606
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Pathway
rmg03030
DNA replication
rmg03430
Mismatch repair
rmg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rhom172_2622
03430 Mismatch repair
Rhom172_2622
03440 Homologous recombination
Rhom172_2622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmg03032
]
Rhom172_2622
03400 DNA repair and recombination proteins [BR:
rmg03400
]
Rhom172_2622
Enzymes [BR:
rmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rhom172_2622
DNA replication proteins [BR:
rmg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rhom172_2622
DNA repair and recombination proteins [BR:
rmg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rhom172_2622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
AAA_5
RuvB_N
AAA_14
AAA_30
DciA
Rad17
AAA_16
RCF1-5-like_lid
AAA_2
DNA_pol3_delta_C
AAA_18
nSTAND3
RNA_helicase
TsaE
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AEN74510
LinkDB
All DBs
Position
2999453..3001279
Genome browser
AA seq
608 aa
AA seq
DB search
MQEQRYLVAARKYRPQLFRELVAQEHVTETLKNALRLNRLGHAYLFSGPRGVGKTTAARL
LAKAINCQTPLEEREDRAEPCRRCEACVAFEEGRSLNVFEIDAASNNKVEDVRELRETVR
VPPQGARKKVYIIDEVHMLSNAAFNALLKTLEEPPPHALFIFATTEPHKVLPTILSRCQR
FDFRRIPVEAIVARLREICAAEGVEADDESLMLLARKGDGALRDALSAFDQAVSLCGTTL
RYAELAQALGVVDLDLYFAVTDHVRTGNGAGMLAVVEQVVRSGYDLQEFAIGLAEHLRNL
LVARTMPDLSLIEAGEATRRRYAEAARAFEEADLLRLLGLVADLESRLKSSAQPRLQLEL
TLLRMASLPHAVDLRRALDLLERLAKTSPPRTDSGGSPPSRTASGPAVRSTPAASKPARP
EAPESRPHTTSEMSSVFGPPALETLKRNRPEGSGGQAALATAEATDVLVAESPAELLVAL
QDRWPEFVRRVAQVRRHVGMVLEDTRPESIEGTTLWVDVRDPAYARLLQNQASFLLQQLC
AFIEEAQQLTALRFRSPKPASEAPAQAAPPAPEPEDPALVLERLRRTSPVVQKLIDQFGC
ELYWGNGQ
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacagcgttatctggtagccgcccgcaagtatcgcccgcagcttttccgtgaa
ctggtcgctcaggagcacgtaacggagacgctgaaaaacgcccttcgtctgaaccgcctg
ggccacgcctatctgttcagcggcccccggggcgttggcaagacgacggccgcgcgcctg
ctggccaaggcgatcaactgccagacgccgctggaagaacgcgaggaccgcgccgaaccc
tgtcgccggtgcgaggcgtgcgtcgccttcgaggaggggcgcagcctgaacgtgttcgag
atcgacgcggcctcgaacaacaaggtcgaggacgtgcgcgagctgcgcgagacggttcgg
gtgccgccgcagggtgcgcggaagaaggtctacatcatcgacgaggtgcacatgctctcg
aacgcggccttcaacgcgctcctgaaaacgctcgaagaaccgccgccgcatgccctgttc
attttcgccaccaccgagccgcacaaggttctgcccacgatcctttcacgctgccagcgg
ttcgactttcgccgcattccggtcgaggccatcgtggcccggctgcgcgagatctgcgcg
gccgagggcgtcgaggccgacgacgagtcgctcatgctgctggcccgcaagggagacggc
gccctgcgcgacgcgctttcggccttcgaccaggcggtttcgctctgcggcaccacgctg
cgctatgccgagctggcgcaggcgctgggcgtggtggatctggacctgtactttgcggtg
accgaccatgtgcgcacgggcaacggtgccggcatgctcgcggtggtcgaacaggtcgtg
cggtccggctacgacctgcaggagttcgccatcgggctggccgagcacctgcgcaacctg
ctggtggcccgcaccatgcccgacctttcgctgattgaggcgggcgaggccacccgacga
cgctacgccgaagccgcccgggccttcgaggaagccgacctgctgcggctgctgggactg
gtggccgatctggaaagccgcctgaaaagcagcgcccaaccccggttacaactggagctg
acgctgctccgcatggccagcctcccgcatgccgtcgatctgcgccgggcgctcgacctg
ctggaacgtctggcgaaaacttcgccgccacgcaccgattcgggcggctctcctccgagc
cgcacggcctccgggccggccgttcgctccacaccggccgcctcgaaaccggcacgtcct
gaggccccggagtcccggccgcataccacgtccgaaatgagctccgttttcggtccacct
gcgctggagacgctgaagcgcaatcggccggaaggctccggcggacaggccgcgctggcc
accgcggaagcaacggacgtactggtggccgaatcccccgccgaactgctggtggcgctt
caggaccgctggccggagttcgtgcgacgggttgcgcaggttcgtcgtcatgtgggcatg
gtgctggaagacacccgacccgagtcgatcgaaggcaccacgctctgggtggacgtccgg
gatccggcttacgcccggctgctccagaatcaggcatcgtttctgctgcagcaactctgc
gcttttatagaagaagcgcaacagctgacagcgctgcgtttccgctccccgaagccggca
agtgaagcgcccgcgcaggcggcacctccagcgcccgaaccggaggatcccgcgctggtg
ctggaacgcctgcgtcgcacctcgcccgtcgtacagaagctgatcgaccagttcggctgc
gaactgtactggggcaacggtcaatga
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