KEGG   Rhodothermus marinus SG0.5JP17-172: Rhom172_2868
Entry
Rhom172_2868      CDS       T01606                                 
Name
(GenBank) CRISPR-associated RAMP protein, Csm4 family
  KO
K19139  CRISPR-associated protein Csm4
Organism
rmg  Rhodothermus marinus SG0.5JP17-172
Brite
KEGG Orthology (KO) [BR:rmg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rmg02048]
    Rhom172_2868
Prokaryotic defense system [BR:rmg02048]
 CRISPR-Cas system
  Type III CRISPR-Cas system
   Subtype III-A factors
    Rhom172_2868
SSDB
Motif
Pfam: Csm4_C RAMPs
Other DBs
NCBI-ProteinID: AEN74745
LinkDB
Position
pRHOM17201:complement(52665..53684)
AA seq 339 aa
MTFQAVYLYPRSSFRTPLRSDTLWGLLVVALRVVAGDREADAFIEACEQGRPPIRLASAF
PFVQEQSADGRPVFRHFFPRPVLPPPLLEPSQADARVVFEQMKQGKKVRRIRWLPQELFE
RVLRGELDEAGLQQELLQQEQSGARKRWPVLLTQDNLHTSIDRLTGTTRQENGAGQLFYS
HEYYMKRGQGLFFLVEGEVARILPALRYLHHVGWGGDSSVGKGHFDWELRELELRVPEKP
THRLLLSLYSPTRAELDHIRQHRDRTFYQLERRQGYAGAHRLPGRAYLKRPLYMLSEGSL
VPDPGRPLLGAVHTVMEADGVRVRHSGLALDLPARVGLS
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgacgtttcaggctgtctatttatatccccggtcctcctttcgcacgcccctgcggtcc
gacacgctctgggggctgcttgtggtggcgctgcgcgtggtggcgggcgaccgggaggcc
gacgccttcatcgaagcctgtgagcaagggcggccgccgatccgtcttgcctcggccttt
cccttcgtgcaggagcaatcggcggatgggcggccggtttttcgccactttttcccgagg
ccggtcctcccgccgcccctgctggagccatcgcaggctgatgcgcgggtcgtttttgag
cagatgaaacaggggaagaaggttcgccggatacgctggcttccgcaggagctctttgaa
cgcgtgttgcggggcgagctcgacgaggcggggctgcagcaggagcttctgcagcaggag
cagtccggagcgcgaaaacgctggcccgtgcttctcacgcaggacaacctgcatacgtcg
atcgaccggcttaccggcaccacgcgccaggaaaacggggccggccagctcttctacagc
cacgagtactacatgaaacgtggtcagggtctgttctttctggttgagggggaggtagca
cgcattctgccggccctgcgctacctgcaccatgtgggctggggcggcgacagttcggtg
ggcaaggggcatttcgactgggaattgcgcgagctggagctgagggtgcctgagaagccc
acgcatcggctgctcctttcgctctacagtcccacgcgtgcggagctggaccatatccgg
cagcaccgggaccgcacgttttatcagctggagcgacgacagggctatgccggagctcat
cggctgcccggaagggcctacctgaaacggccgctgtacatgctgtcggaagggtcgctc
gttcccgatcccggccgtccgctgctgggcgcggtgcatactgtgatggaagcggacggg
gttcgggtgcgtcatagcgggctggcgctcgacctgcccgccagggtcggtttatcctaa

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