Roseivivax marinus: LVO79_01735
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Entry
LVO79_01735 CDS
T08313
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
rmh
Roseivivax marinus
Pathway
rmh00550
Peptidoglycan biosynthesis
rmh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rmh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LVO79_01735 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rmh01002
]
LVO79_01735 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rmh01011
]
LVO79_01735 (dacB)
Enzymes [BR:
rmh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LVO79_01735 (dacB)
Peptidases and inhibitors [BR:
rmh01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
LVO79_01735 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
rmh01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LVO79_01735 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
UMA65221
LinkDB
All DBs
Position
364648..366153
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AA seq
501 aa
AA seq
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MTAPLTRRRFLAALAATTAAAPAFANAPETSLRPLARGEDFFKRAVPTLDEIASAANLDG
FLGCAVGNTETGELLEDLNGAEGLPPASVAKALTASYALEHLGPDHRFATRLLTTGEVSE
DGTLDGDLILAGGADPTLDTDGLAALAGDLRDAGVSSVTGRLLVWGGALPEVPAIDPGQP
DHVGYNPSVAGLNLNYNRVHFEWQRAGEGYQVAMDGRSDSLRPPVHMARMVVVARRTPVY
TYHDGDARDEWTVAKSALGNAGSRWLPVRRPTLYAGEVFQAVAGSNGLRLKSPEVVDTLP
EDARELARRESQPLTDILQDMLKWSTNLTAEVVGCAATAAATGSVPASLEASAAELNGWA
EAELGVTGIALVDHSGLGEDSRVAPVAMTRALIALRERLDLKPILKPIPMRDDARRILSN
HPLDVHAKTGTLNFVSGLAGYIDCPDGTELAFAIFSGDLDHRATIAREDREGPPGARTYN
TRAKKWQMELIKRWGTVYGTA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgccattgacccgccgccgcttccttgccgcgctcgccgccaccacggccgcc
gcgcccgctttcgccaacgcgcccgagacgtccctccgcccgcttgcgcgtggcgaggac
tttttcaagcgcgcggtgcccacccttgacgagatcgcctcggccgcgaacctcgacggc
tttctcggctgcgcggtgggcaacaccgagaccggcgagctgctggaggatctgaacggc
gccgaaggcctgccgcccgcctccgtcgccaaggcgctgaccgcgtcttacgcgctcgag
catctgggccccgatcaccgcttcgccacgcggctcctgaccaccggagaggtgtccgag
gacggcacgctcgacggcgacctgatccttgccggcggcgcggaccccacgctcgacacc
gacgggttggcggcgcttgcgggcgatctgcgcgatgccggcgtgtcgtcggtcacgggc
cgcctgctggtctggggcggcgcactacccgaggtgccggcgatcgatcccggtcagccc
gatcacgtcggctacaacccgtcggtcgcaggcctgaacctcaactacaaccgcgtccac
ttcgaatggcagcgcgcgggcgagggctaccaggtggcgatggacggccgctcggacagc
ctgcgcccgccggtgcacatggcgcgcatggttgtcgtggcgcggcggacgccggtctac
acctaccacgacggcgacgcgcgcgacgaatggaccgtggccaagtccgcgctgggcaat
gccggctcgcgctggctgccggtgcggcgtccgacgctctacgcgggcgaggtgttccag
gccgtggcaggctcgaacggtctgcgcctgaagtccccggaggtggtcgacacgctgccc
gaggacgcgcgcgaactggctcgccgcgagagccagccgctgaccgacatcctgcaggac
atgctcaagtggtcgacgaacctgaccgccgaggttgtcggctgtgcggccaccgcggcc
gcgaccggatcggtgcccgcctcgctcgaggcgtcggccgccgagctgaacggctgggcc
gaggccgagctgggcgtcaccggcatcgcgctggtcgatcattcgggtctcggcgaggac
agccgtgtcgcgccggtggcaatgacgcgcgcgctgatcgccctgcgggagcggctggat
ctcaaaccgatcctcaagcccattcccatgcgcgacgacgcgcgccggatcctgtcgaac
catccgctcgacgtgcacgccaagaccggcacgctgaacttcgtctcggggttggcgggc
tacatcgactgtcccgacgggaccgaactggccttcgcgatcttttccggtgacctcgat
caccgcgccaccatcgcacgcgaggaccgcgagggcccgccgggcgcacgcacctacaac
acccgcgccaagaagtggcagatggagctcatcaagcgctggggcaccgtctacggcacc
gcctga
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