Roseivivax marinus: LVO79_01935
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Entry
LVO79_01935 CDS
T08313
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rmh
Roseivivax marinus
Brite
KEGG Orthology (KO) [BR:
rmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rmh03009
]
LVO79_01935 (rimO)
Enzymes [BR:
rmh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LVO79_01935 (rimO)
Ribosome biogenesis [BR:
rmh03009
]
Prokaryotic type
ribosomal protein modification factors
LVO79_01935 (rimO)
BRITE hierarchy
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GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
ACP_syn_III
Motif
Other DBs
NCBI-ProteinID:
UMA65257
LinkDB
All DBs
Position
complement(397363..398742)
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AA seq
459 aa
AA seq
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MAQNPPDLRPDRAQARLDRDLSTVRAGRDQPTIGMVSLGCPKALVDSERILTRLRAEGYG
ISPDYSGADAVIVNTCGFLDSAKAESLDAIGEALSANGRVIVTGCLGAEPDYITGAHPRV
LAVTGPHQYEQVLDAVHAAVPPDPDPFVDLLPASGVKLTPRHYSYLKISEGCNHKCKFCV
IPDMRGRLASRPHKAVMREAEKLVDSGVKELLVISQDTSAYGTDWSDRPSKFPILDLARD
LGQLGAWVRMHYVYPYPHVRELVPMMAEGGVLPYLDIPFQHAHPDTLKRMARPAAAERTL
DEIAAWRRACPDITLRSTFIVGYPGETEDEFQTLLDWLDEAQLDRVGCFQYENVAGARSN
ALPGHVPDEVKQERWDRFMEKAQAISEAKLAAKVGTRLTALVDAVDEEGATCRTAADAPE
IDGNLFVDRGFEGLAPGDMIEVEVDEAGEYDLWGARVDA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaacccgcccgatctccgtcccgaccgcgcccaggcccggctcgaccgcgac
ctatccaccgtccgcgccgggcgcgaccagcccaccatcggcatggtgtcgctgggctgt
cccaaggcgctggtggacagcgagcgcatcctcacgcgcctgcgcgccgagggatacggc
atctcgccggactattccggcgcggacgcagtgatcgtgaacacctgcggcttcctcgac
agcgcgaaggccgaaagcctcgatgccatcggcgaggcgctgagcgcgaacggacgggtg
atcgtgaccggctgcctcggcgctgagccagactacatcaccggcgcgcatccccgcgtg
ctggctgtcaccggcccgcaccagtacgagcaggtgctcgacgcggtgcacgccgccgtg
ccgcccgatcccgatccgttcgtggacctgctgcccgcctcgggcgtgaagctcacgccg
cggcactacagctacctcaagatctcggagggctgtaaccacaagtgcaagttctgcgtg
atccccgacatgcgcggacgcctcgcctcgcggccgcacaaggcggtgatgcgcgaggcc
gagaagctggtcgatagcggcgtgaaggagcttctggtcatcagccaggacacctcggcc
tacggcaccgactggtccgaccggccgtccaagttcccaatcctcgatctcgcgcgcgac
ctgggccagctcggggcgtgggtgcggatgcactacgtctacccctacccgcacgtccgc
gagctggtgccgatgatggccgagggcggcgtgctgccctatctcgacattccgtttcag
catgcccatcccgacacgctgaagcgcatggcgcgccccgccgcggccgagcgcacgctc
gacgagatcgccgcttggcgccgggcgtgcccggacatcaccctgcgctcgacgttcatc
gtgggctaccccggcgagaccgaggacgagttccagaccctgctcgactggctggacgag
gcgcagctcgaccgggtcgggtgcttccagtacgagaacgtcgccggcgcccgttcgaac
gccctgcccggccacgttcccgacgaggtgaagcaggagcgttgggaccgcttcatggag
aaggcgcaggcgatctcggaggccaaactggcggccaaggtcggcacccggctcaccgcg
ctggtggatgccgtggacgaggagggcgccacttgccgcacggcggcggatgcgccggag
atcgacggcaacctcttcgtggaccgcggcttcgaagggctcgcacccggcgacatgatc
gaggtcgaggtggacgaggccggtgaatacgacctctggggtgctcgagtggacgcctga
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