Roseivivax marinus: LVO79_03440
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Entry
LVO79_03440 CDS
T08313
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rmh
Roseivivax marinus
Pathway
rmh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rmh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LVO79_03440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmh03021
]
LVO79_03440
03400 DNA repair and recombination proteins [BR:
rmh03400
]
LVO79_03440
Enzymes [BR:
rmh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LVO79_03440
Transcription machinery [BR:
rmh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LVO79_03440
DNA repair and recombination proteins [BR:
rmh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LVO79_03440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
RepD-like_N
Motif
Other DBs
NCBI-ProteinID:
UMA65530
LinkDB
All DBs
Position
680860..681876
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLDIRPGNDPSRTATVVAEPLERGFGLTLGNALRRILLSSLQGGAIT
SVQIDNVLHEFSSVAGVREDVTDIVLNLKGVSLRMEVEGPKRLSISAKGPGAVTAGDISE
SNGIEILNKDHVICHLDDGADLFMELTVNTGKGYVSADKNKPEDAPIGMIPIDAIYSPVK
KVAYDVQPTREGQVLDYDKLTLKVETNGAVTPEDAIAYAARILQDQLSIFVNFDEPESAS
RDDGDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLSKKMEDSF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaactgggccgagctgatcaagcccacgcaactcgacatccgtccgggc
aacgatcccagccggaccgcgaccgtcgtggccgaaccgctcgagcgcggcttcggtctc
acgctcggcaacgccctgcgccgcatcctgctgtcctcgctgcagggtggcgccatcacg
tcggtgcagatcgacaacgtcctccacgagttctcgtcggtggccggcgtccgtgaagac
gtgaccgacatcgttctgaacctcaagggtgtcagcctgcgtatggaagtcgagggcccc
aagcgcctctcgatctcggccaaggggccgggcgccgtgaccgccggtgacatctccgag
tcgaacggtatcgagatcctcaacaaggatcacgtgatctgccatctcgacgacggcgct
gacctgttcatggaactgactgtcaacaccggaaaaggctacgtctccgcggacaagaac
aagcccgaggacgcgcccatcggcatgatcccgatcgacgcgatttactcgccggtcaag
aaggtcgcctacgacgtgcagcccacccgtgagggccaggtgctggactacgacaagctg
accctcaaggtcgagaccaacggcgcggtcacgcccgaggacgcgatcgcctacgcggcc
cgcatcctgcaggaccagctgtcgatcttcgtcaacttcgacgagccggaaagcgcctcg
cgcgacgacggcgacgacggtctggagttcaacccgctccttctcaagaaggtcgacgag
ctcgagctgtcggtccgttcggcgaactgcctgaagaacgacaacatcgtctacatcggc
gacctgatccagaagaccgaagccgagatgctccgcaccccgaacttcggccgcaagtcg
ctgaacgagatcaaggaagtgctgtcgggcatggggctgcacctcggcatggatgtcgag
gactggccgccggacaacatcgaggatctctcgaagaagatggaagactcgttctga
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