Roseivivax marinus: LVO79_07195
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Entry
LVO79_07195 CDS
T08313
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rmh
Roseivivax marinus
Pathway
rmh00071
Fatty acid degradation
rmh00280
Valine, leucine and isoleucine degradation
rmh00310
Lysine degradation
rmh00362
Benzoate degradation
rmh00380
Tryptophan metabolism
rmh00410
beta-Alanine metabolism
rmh00640
Propanoate metabolism
rmh00650
Butanoate metabolism
rmh00907
Pinene, camphor and geraniol degradation
rmh00930
Caprolactam degradation
rmh01100
Metabolic pathways
rmh01110
Biosynthesis of secondary metabolites
rmh01120
Microbial metabolism in diverse environments
rmh01200
Carbon metabolism
rmh01212
Fatty acid metabolism
Module
rmh_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rmh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LVO79_07195
00650 Butanoate metabolism
LVO79_07195
09103 Lipid metabolism
00071 Fatty acid degradation
LVO79_07195
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LVO79_07195
00310 Lysine degradation
LVO79_07195
00380 Tryptophan metabolism
LVO79_07195
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LVO79_07195
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LVO79_07195
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LVO79_07195
00930 Caprolactam degradation
LVO79_07195
Enzymes [BR:
rmh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LVO79_07195
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LVO79_07195
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LVO79_07195
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
NAD_binding_2
DAO
F420_oxidored
NAD_binding_8
Sacchrp_dh_NADP
adh_short_C2
TrkA_N
DFP
2-Hacid_dh_C
XdhC_C
Shikimate_DH
NAD_Gly3P_dh_N
UDPG_MGDP_dh_N
Epimerase
RS_preATP-grasp-like
Peptidase_S41
Motif
Other DBs
NCBI-ProteinID:
UMA66223
LinkDB
All DBs
Position
1492811..1494925
Genome browser
AA seq
704 aa
AA seq
DB search
MTHPATAARAPETGIATLSLADHEADSFATELRAILARSPAGILIDGCGATGPVFNDPHE
IVRRFGAGTDRTFATDWAAGRGAVLREMETSGVPVACLWSGPAFGAGWEIMLAAHARFLD
GDAKSSAPKDLSMSLLPAAGAVQRLARIVGVETASELLMGNPADGASLEASGLWTCCEAG
SAEARALDWLAQAAEARQPWDERRFRVPGGTGATAAHAAKSFTLPAIAARGKGHDCDPAP
LATLRALYEGSQLDMDAALTRDAGIAAALLIGGIATNRIRTLVVNKAKAEAGAARPAAPR
CTVNLLGVLGAGMMGAGIARAAAEQGIEVVLIDRDTESAEKGVAGIAKALDIAVTKGRQS
ADGAGAILDRITPAADYAALSGAELVIEAVFEQTDLKRDLTSAVLPHLSADTIVASNTST
ISINTLAGALPDPDRFIGLHFFSPVDRMPLVEIITGSKTSDATLAAALDFTMQLGKTPIV
VNTSPGFFTSRIFCTYIDEAMAMLAEGVAPALIENAARMIGAPVGPLAVTDEVSLDLQKK
VIDQAEADKLDARFLRGHAKPVVERMVALGRLGRKTGAGFHDFPEDGPKRLWPGLAEEFP
LTATQPDVETIKARLLSIQSLESARCVEEGVVERPADADLGSVLGVGFPPWTGGVLSHVD
TVGPAAFVAACDMLADLYGDRFRPSDWLRERAARGARFHEGETS
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgacacatcccgcaaccgcagcgcgcgcacccgaaaccgggatcgccacgttgagcctt
gctgaccacgaggctgatagctttgcgacggaactacgcgcgatccttgcccgctcgccg
gcggggatcctgatcgacggatgcggcgctacgggcccggtcttcaacgacccgcatgaa
atcgtccggaggttcggcgccggaacggatcgtactttcgcgacggactgggcggccggg
cggggcgcagttctgcgcgagatggaaacgtccggggttcccgtcgcctgcctttggtcc
ggtccggccttcggcgctggatgggaaatcatgctcgcggctcacgcccggttccttgac
ggagacgccaagtcgtccgcgcccaaagacctgtcgatgagcctcttgcctgccgcaggc
gccgttcagcgattggcgcggatcgtcggggtggaaacagcgtcggagctgttgatgggc
aacccggcagacggtgcgtcgctggaggcctccggtctctggacctgttgcgaagcgggc
agcgcggaagcccgagcgctggattggctggcgcaggctgctgaagcgcggcagccatgg
gacgagcggcgctttcgtgttccgggcggaaccggtgcgacagccgcacatgccgcgaag
agtttcaccctccctgctatcgccgcgcgcggcaaggggcacgactgcgacccggccccc
ctggcaaccctgcgcgcgctctacgagggctcccaattggatatggacgcggctctgacc
cgagatgccggcatagcggccgcgctgctgatcggcggcatcgccacgaaccgcatccgt
acattggttgtgaacaaggcgaaggccgaagcgggtgctgcgcgccccgcggcgccgcgc
tgtacagtgaacctcctcggcgtgctcggtgccgggatgatgggggctggaatcgcccgc
gcagcggccgagcaaggcatcgaagtggtgctcatcgaccgtgacaccgaaagcgcggag
aagggagtcgcggggattgccaaggcgctcgacatagccgtcaccaaagggcgccagagc
gcggacggcgcgggggcgatcctcgaccggatcacccccgccgccgactatgctgcgctc
tcgggcgcggagctggtgatcgaagcggtgtttgagcaaaccgatctcaagcgggatctc
acgagcgccgtgctgcctcacctttccgccgacaccatcgtcgcctccaatacgtcgacc
atatctatcaatacgctggcgggggcgctgcccgacccggatcgctttatcgggttgcac
ttcttctcgccggtggaccggatgccgctggtggagatcatcacggggagtaaaaccagc
gacgcgacactggcagccgcgctggatttcacgatgcagctcggaaagacgcccatcgtc
gtgaacacctcgccggggttcttcaccagtcgcatcttctgcacctatatcgacgaggcg
atggcgatgctggccgaaggcgtcgcaccagcgctgatcgagaacgctgcgcgcatgatc
ggcgcgcccgttggaccgctcgccgtgaccgatgaggtatcgctcgacctgcagaagaag
gtcatcgaccaggccgaggccgataaactcgacgcgcggttcctgcgcggacacgccaag
cctgtggtcgagcggatggtcgcgctcggccggctcggccgcaagaccggcgcgggcttc
cacgactttcccgaggacgggccaaagcggctctggcccgggctcgcggaggagttcccg
ctgacagcgacacagccggacgtagagacgatcaaggcccggcttctgtcgatccagtcg
ctcgaatccgcgcgctgcgtggaagaaggcgtggtcgaacgcccggccgacgccgacttg
ggctccgtgctcggcgtgggtttcccgccttggacgggcggcgtgctgagtcacgtagac
acggtaggcccggccgctttcgtcgccgcctgcgacatgctcgcggacctgtatggcgat
cgtttccgcccctcggactggctgcgtgagcgtgccgctcgcggcgcgcggtttcacgaa
ggagagacgtcatga
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